EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-08486

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr3:95013600-95016270

Target genes

Number: 28
Name	Ensembl ID

Psmb4	ENSMUSG00000005779
Rfx5	ENSMUSG00000005774
B230398E01Rik	ENSMUSG00000087660
Pi4kb	ENSMUSG00000038861
A730011C13Rik	ENSMUSG00000084846
Gm15265	ENSMUSG00000086288
Zfp687	ENSMUSG00000019338
4930481B07Rik	ENSMUSG00000085956
Psmd4	ENSMUSG00000005625
SNORD62	ENSMUSG00000064952
Pip5k1a	ENSMUSG00000028126
Vps72	ENSMUSG00000008958
Tmod4	ENSMUSG00000005628
Scnm1	ENSMUSG00000092607
Tnfaip8l2	ENSMUSG00000013707
Sema6c	ENSMUSG00000038777
Gm16740	ENSMUSG00000085137
Gabpb2	ENSMUSG00000038766
Mllt11	ENSMUSG00000053192
Cdc42se1	ENSMUSG00000046722
Gm128	ENSMUSG00000068860
Bnipl	ENSMUSG00000028115
Fam63a	ENSMUSG00000038712
Prune	ENSMUSG00000015711
Anxa9	ENSMUSG00000015702
Lass2	ENSMUSG00000015714
Setdb1	ENSMUSG00000015697
Arnt	ENSMUSG00000015522

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESR2	MA0258.2	chr3:95015924-95015939	AGGCCAGCCTGACCT	-	6.62
Foxd3	MA0041.1	chr3:95014416-95014428	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr3:95015995-95016007	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr3:95015999-95016011	AAACAAACAAAC	-	6.32
Stat6	MA0520.1	chr3:95014980-95014995	GAGTTCCTGAGAAAT	+	7.35
TCF7L2	MA0523.1	chr3:95015034-95015048	TCTCTTTGAACTTT	-	6.08

Enhancer Sequence

CTCAGAAAGA GATCTCAGCT CTGACCACCT TGTAGGAGAC TGGAGCCAAT GATAGTAGTT 60
AGGGCCACAG CTGGCCCAGG AGTGATTAGT TAGTTATACG TACATACTTT CTATCGACCT 120
AAAACTCATG TTACATCAGA ACCCCCACAC AGACTGGGGG TGTCCCGGGC TCTGTTTCCA 180
GTGGCCACAC TGAATCAATC CTTTTCTGCT TGTCGTTATT ACTGTACATC TACTTGACAT 240
ATCCAATGAT GGATGGCCAA GCCTAGCTTG TTAGGGATGC CAGGGCTCAA GCTCTCACTC 300
ACCCTTACAA GCACAGTAAC AATTCTGGCA AACCACAGCT AGGAGAAACA GTCAGCAATG 360
AAGAGGACAG ACTGAATGGC ACCAATTAGC TGCTGAGGTC ATTTTATTCC AGAGAGTTCT 420
TTCTTTTGAG AAAGAATCTT TCTGTATCTG GCTGTCCTGA AAATATGAAG ACCAGGCAGG 480
CTTCAAACTC ATAGATCTAC CTGCCTCTGT CTCCTGAGTG CTAGATGGCC ACGATGCCCA 540
GCTAGGGACT TTTATCTTCC CATTTCCCCT CTCATCTGTT TTGGTTGTTG TTTTTCCTCT 600
ATATGAAGAA GCAGAGAAAT GAGTATTTGG ACTTGGTATT GGAGTCTTGA GATAGCCTGG 660
CCCAAGCCGG GCAGTGGTGA CGCACGCCTT TAATCCCAGC ACTTGGGAGG CAGAGGCAGG 720
TGGATTTCTG AGTTCGAGGC CAGCCTGGTC TATAAAGTGA GTTCCAGGAC AGCCAGGGCT 780
ACACAGAGAA ACCCTGTCTT GGAAAAAAAC CAAACCAAAC AAACAAACAA AAAACCAAAA 840
AACCCAGAGA TAGCCTGGCC CATAGAAATT TTCTGCAATA GGCTTTATCT GAAGTTCTGA 900
GCTGTTTCAA TTCTGTTGAA CTATTTGGGT TGTCATAATG CAAGCCTTGT TAAGTGTGTG 960
TGTGTGGTAT CTGTATATAT GTCTGTGCAC CACATGTGTG CCTGGTACCA AGAGAGGCAA 1020
GGTGGCCCTG GATCCCTTGA AGCTAGAGTC ACACCTGTGA GCTATCATGT GGGTGCTATA 1080
TCTCAAACCC TGATCTTGCA GATCAGATAG TGCTCTTAAC CACCAAGCCA CCTCTCCAGC 1140
CCCAAGTCTT GGCATTTTGA AAGCTCTTTT GAAGGATCTG GAAATCTACA CGATGGTTAA 1200
AGCGTGTCTG TCTTGAGGCA GAGAAGCAAG CATGCTGAGA ACTCTATTGT TATTTGTGTA 1260
ACCATGGAAA ATACTGTTTG TACTATCTTA ATGGCCCTTT GGGGAAATTC TAGATGACTA 1320
AATCTTTTGT AAACTCATCA GTTTCTAAAG CATCATGGGG CAGAACTTAA TCTGTCTACA 1380
GAGTTCCTGA GAAATAACTG AGTAGTGTGG CCCTGCCTAC TTCATTTTTC GTTGTCTCTT 1440
TGAACTTTCT GTGTGCTAAA ATTACTGTTC TTGACATGCC TGCTTTAAAA GGTATGTATT 1500
TATAATATGT GAATATCTAA GGGCAGATTT TGGAGTTGCG CCCTCAGCTT TTATTTTATT 1560
TTTTATTCCT TTGAAAAGTA ACCTAAAATA CAGAACGTAA TAGCTAACTA TATAAATTGT 1620
GACTAGATCA TTTCCCCACC TCCACAGGTT CTCAGTGTGT AGTCCTGGCT AGCCTGGGAA 1680
ATATGATATA GACCAGGCTG ACCTAGAAAT AGCAAAGATT CACCAGCTCA TTTTGAAAAG 1740
AAATTAAGTT TTACTTTTTT ATGTCAAGAG TACCTGAAAA GACATTTAAA AACAAACAAA 1800
ACAAAACAAA ACAAAAACAA ACAAATACAC ACCTAGGCTG GAGAGATGGC TCAGTGGTTA 1860
AGAGCACTGA CTGCTCTTCC AGAGGTCCTG AGTTCAATTC CCAGAAACAA CATGGTAGCT 1920
CACAACCATC TGTACTGAGA TCTGATGTCC TCTTCTGGAG TGTCTGAACA GTGACAGTGA 1980
CTTATATAAT AAAACAAATA ATTAAAGCTA TTTATTCATT TATGTATTTG AGACAGAATC 2040
TCTTGTAGTC ACACTAGTCT CCAACATGTC ACATAACCAA GGAGGACCCT GACTTCCTGA 2100
TTCCCCTGTC TCTAGCTCTC GAGTGCTGAG ATTATAGTTG TGTATCACCA CGGTCAATTT 2160
ATGTCGTACT GAGGACTAAG TCCACACACA GCTTTGTGCC AGGAATCTAG CCAACAGAGC 2220
CACATCCTTA GGCCCATAAA AGTCCTTTGT ATTACCAGCT GGTGGTGGCA CTTGCCTTTA 2280
ATCCCAGCAC TTGGGAGGCA GAGGCAGGCA GATTTCTGAG TTTCAGGCCA GCCTGACCTA 2340
CAAAGTGAGT TCTAGGACAG CCAGGGCTTC ATAGAGAAAC CCTGTCTCAA AAGAAAAACA 2400
AACAAACAAA CAAAAAACCC TTTATGTTGA TGGAAATGCC TCTGAATAAC GTACATAAAA 2460
TCATTCTGGA CAGGTGACAG AGGCATTTGT CTTTAATCCC AGCCCCGGAG GCTGAGGCAG 2520
GTGGATCTCT ATGAGTTGGA GGCCAGGCTG GTCTATAGGC CAAGTTCCAG GATGGCCAAG 2580
GCTACACAGA GAGTCCCTGC TTGAAACTGC ACCCATAAAT AAATAAATAA GCAAATAAAA 2640
TAATCCTTTT GTGGAGTTAT TGCTATGTTT 2670