EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-06676

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr19:3743840-3744610

Target genes

Number: 11
Name	Ensembl ID

Ppp6r3	ENSMUSG00000024908
Lrp5	ENSMUSG00000024913
1810055G02Rik	ENSMUSG00000035372
Suv420h1	ENSMUSG00000045098
Chka	ENSMUSG00000024843
Ndufs8	ENSMUSG00000059734
Aldh3b1	ENSMUSG00000024885
U3	ENSMUSG00000064400
Tbc1d10c	ENSMUSG00000040247
Ppp1ca	ENSMUSG00000040385
Adrbk1	ENSMUSG00000024858

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr19:3744051-3744064	GAAGATTCTGGAA	-	6.16
HSF2	MA0770.1	chr19:3744051-3744064	GAAGATTCTGGAA	-	6.13
HSF4	MA0771.1	chr19:3744051-3744064	GAAGATTCTGGAA	-	6.21
SP2	MA0516.2	chr19:3744420-3744437	GCAAGCCCCTCCCCCTA	+	6.2

Enhancer Sequence

AATAAAACTA TGAAACTTTT AGAAGAAAAT GATCTTGGCA TAGAAAAGTA ATCCTTAGAT 60
TTGACTCCAA ATTACAGAGT TTAACAGAAA AAAAAAAAAG ATGAGCAGAC ACCACATTTG 120
AAAACTTTGG CTCTGCAAAG ACAACATTAT GACAATGAAA AGCTCAGAGA CAGGCTTAAA 180
CAAGACGGTG TAAGTCTCTC ATCCTGCCGG AGAAGATTCT GGAAAAATAT CTGAGTGGGA 240
AGCACCGCAA GATCCCTCTC CACCTAGACA ATTTGCACGG GCAGAATCTT GTCTCTTACA 300
ATTATTTCCC AACTTTCCAG TCCATCGAGG GCTTGGAAGC TCGGGGGAGG GGAGGACCAA 360
TGCGTGGCAG TTTGTTTTGG GCAATGCTAG CTCTTGGTGT GACAGCGGCT GTTCCTCTCC 420
TGTCCCAGCC CATGGGCAGG CAGCTGCGCA CAGGCTCCAG AAACAGCGAA GCCAGGTAGA 480
ATAACACGGG AATGCAGGCT CAGGTCTCTG ACAGTCGACT TGCCTTGGAG GTGCAGACAA 540
AGAGGCAGGT GGCCATTGAG GGCGCACCTC CTCCATTGTT GCAAGCCCCT CCCCCTAGCT 600
GAAGTGACAA GATGGGGATT TAAAGGGCCA ATGTTCTTTT CTCTGTCTCT CTGTCTCTGT 660
CTCTCTCTCT GTCTCTGTCT CTCTCTCTCT CCTTTCAGAG CCCAGAATTT AAACATTAAG 720
GCAGGCGCCA AAAACAGTTA TATATACAAG GAGAATTAAA AAGAGATGGT 770