EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-04172

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr14:54163650-54165940

Target genes

Number: 20
Name	Ensembl ID

Trav5n	ENSMUSG00000091180
Trav12n	ENSMUSG00000076810
Trav16	ENSMUSG00000076822
Trav14n	ENSMUSG00000076824
Trav4	ENSMUSG00000076826
Trav6	ENSMUSG00000076766
Trav10	ENSMUSG00000076834
Trav12	ENSMUSG00000076838
Trav14	ENSMUSG00000076840
Trav15	ENSMUSG00000076841
Trav9	ENSMUSG00000076842
Trav13	ENSMUSG00000076846
Trav3	ENSMUSG00000076849
Trav5	ENSMUSG00000076852
Trav7	ENSMUSG00000076854
Gm14031	ENSMUSG00000085302
Gm13896	ENSMUSG00000076855
B230359F08Rik	ENSMUSG00000087666
Trav17	ENSMUSG00000076860
Trav20	ENSMUSG00000086858

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF1	MA0050.2	chr14:54165589-54165610	GAAATCAAACTGAAACTACAG	-	6.2
KLF4	MA0039.3	chr14:54164551-54164562	GCAGGGTGTGG	-	6.62
Klf1	MA0493.1	chr14:54164553-54164564	AGGGTGTGGCC	-	6.32
Klf1	MA0493.1	chr14:54165249-54165260	TGGGTGTGGCC	-	6.62

Enhancer Sequence

GGTGGGCTGT AAGCTATTTT GGATCAGATT ATGTAGTTGT TTTTTTTTTT TTTATCACTA 60
GTCTCATTTC TCATCCAGTC TCTTTATGGT AAAGCTTTAC AATGCAGTCC TCTGCATAGC 120
ACAGTGTTTC CTGCAGTCAG GACACCAGGG CTGCTGCCCT GTCATTCTGG AATGCAGCTC 180
TCCTACATTA GTTTTCCTCA GTACACTTCT TTCTTATGGA GTCCTATTTT TTATACAGCA 240
TTTAGAACAC ATGGTGACTG TTGCAGGAGT GTCCCACACT TTAAAATGCA TTGCAAAGCT 300
AGGAAACCAT TGCACTTGGC TATATCTTTA TGTTCCTGGT TCTTTTTCTA CTGCACTGAT 360
CTCACTTAAA TTATTTCATA GGTGAAGACT TCTTTTTTGG TAATGCATAT GAGTGTGAGT 420
CTGTGTAAAC ATCTGGTACC CATGTACAGG TTCTGAAGAG GACCAAAGAC AGCATCTGAT 480
TCCCTGGACC TGGAGTGACA GGCTGCTGTG AGCCACCTGA TGTGGATGCT AGCAAGGGAG 540
CTAAGGCCTC TAGGCAAAAA AAATACCCTT AACTGCTAAG CCATCTTTGA GGCTCCAATA 600
AAAGCTCTTT AGTTTTTAGA ACATACAACT GTTTCCTGAG TTAAAATTTT GGTTTTTTGT 660
TTTTGTTTTT TGTTTTTTGT TTTTTGTTTT TTTTTTTTTT ACTGAGATTT CCAGGCTTTG 720
TACACAGCTG AGGCACATTC TCTTGGGATG ATGGAGTCCT CTCTTTCTCA TGGTTTTCTA 780
ACTCCATACA ACCCAAGGGT CATCTCAGAA TGTCCCCCTC CCCTCACTGT TCTCTACCCA 840
ATCTCTCAGC GAGGTCTTGC ATGGGAGGAG CTTCAGGCTC TGAAGGCTGG GAGGGAACTC 900
AGCAGGGTGT GGCCAGGCAG GGTTCCTGAG TGGAGCTGAC TAGTTGCAGA AGAAGGAGGG 960
GACACTTCAA CAGCCACCCT GACACCACAG CCCAGGGACT GGTTACTTGC TTCTGTCTCC 1020
AGCAACCACA CAAGCACCAT GAAGAGGCTG CTGAGCTCTC TGCTGGGGCT TCTGTGCACC 1080
CAGGTTTGCT GTGAGTCTGG GTGTCCGCAT TCATGGCACC TGAGAGGATC TGGGTCAGCA 1140
CATGGAGGGG TGGGGAGAGC AGCTCAGGAG TCCTGCAGAG CTCCCACCTT CTCAGAGGCC 1200
ATGGGTGTGC TCAGGGCTCT GTGGACACTG CAGTGACAGC CATCTGTGAC TCTTTCTCTG 1260
TTTCTAATCA GGGGTGAAAG GACAGCAAGT GCAGCAGAGC CCCGCGTCCT TGGTTCTGCA 1320
GGAGGGGGAG AACGCAGAGC TGCAGTGTAA CTTTTCCACA TCTTTGAACA GTATGCAGTG 1380
GTTTTACCAA CGTCCTGGGG GAAGTCTCGT CAGCCTGTTC TACAATCCTT CTGGGACAAA 1440
GCATAGTGGG AGACTGACAT CCACTACAGT CATCAAAGAA CGTCGCAGCT CTTTGCACAT 1500
TTCCTCCTCC CAGACAACAG ACTCAGGCAC TTATCTCTGT GCTTTGGAAC CACAGTGCTC 1560
CACACACACC TGCAGCCCGA ACACAAACCT TCAGCTGGGT GGGTGTGGCC CTTTGCAGTC 1620
ACAAGACATC AGGAAGCCAC AAAGACTATC TGTCTGGTTT AAATATACCT TTCCTGTATT 1680
GGTAGAGTTG TAACTTCAGG TGAGCTTTTG TCCTTGTAGG GTCAGGACAT TGGTCTTTAT 1740
CTTCATTGCT CCATGCACAC ACCCTCTCAA AGCATGAATG CCTATGTTAG AACCAGCAGA 1800
GAAGCTGATG GGAGGATAGA ATCAACATGA TCATTTAAGC CACAGAGTGC AGAACTCATA 1860
AATGTTGAGG AGAAAATGGA ATGAGAGGCA AAGGCAGGCT TCCAGGTAGA ACTGCTGTGG 1920
GGGTCAGGAT TAGTGAGGAG AAATCAAACT GAAACTACAG CAAAAACATT GAACCGTGTA 1980
AGATATAGAA TGCACAGATA GCTGCTTGCT CTCGTCGCCT TTCTGCTGCT GGGATAAAAC 2040
ACTGAGTAAA AGCAACCTAG AAGGTGATCA GATTTATTTA GCTTTCACTT CCAGATCATA 2100
GTTCAACATT GGTGTTAATT AAGGCAGGAA CTCAAACAAG AGATTCAAAC AGAAACCATG 2160
CAGGAAGGCT GTTAATAACT CACTCGCAGA ATCATCCCTA ATTAGCTTCC TTACAACCCA 2220
GAACCACTTT CCCACAGAAC AGTGTCACCC ACAGTGATTT TTTGAATCTT CTAATTCATT 2280
ATTGAGGGTT 2290