EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-04160

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr14:53872440-53874570

Target genes

Number: 26
Name	Ensembl ID

Trav4d	ENSMUSG00000076782
Rps19	ENSMUSG00000072548
Trav12d	ENSMUSG00000076783
Trav3d	ENSMUSG00000076789
Trav16d	ENSMUSG00000076796
Trav13d	ENSMUSG00000076797
Trav9n	ENSMUSG00000079237
Trav12n	ENSMUSG00000079098
Trav14n	ENSMUSG00000076804
Gm6755	ENSMUSG00000072531
Trav5n	ENSMUSG00000091180
Trav15n	ENSMUSG00000076813
Trav4n	ENSMUSG00000076816
Trav6n	ENSMUSG00000076818
Trav7n	ENSMUSG00000076819
Trav8n	ENSMUSG00000076821
Trav16	ENSMUSG00000076822
Trav7	ENSMUSG00000076828
Trav6	ENSMUSG00000076766
Trav12	ENSMUSG00000076838
Trav13	ENSMUSG00000076839
Trav15	ENSMUSG00000076841
Trav4	ENSMUSG00000076843
Trav14	ENSMUSG00000076847
Trav3	ENSMUSG00000076849
Gm13896	ENSMUSG00000076855

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GFI1	MA0038.2	chr14:53872846-53872858	TGCAGTGATTTC	-	6.74
KLF4	MA0039.3	chr14:53873332-53873343	GCAGGGTGTGG	-	6.62
Klf1	MA0493.1	chr14:53873334-53873345	AGGGTGTGGCC	-	6.32
Znf423	MA0116.1	chr14:53873218-53873233	GCAACCCAAGGGTCA	+	6.01

Enhancer Sequence

GGTTGTGAGC TATTTTTGAG ACAATTGTGT GTGTGTGTGT GTGTGTATGT GTGTGTGTGT 60
GTGTGTGTGT GTGTGTGTGT GTGTGTGTTT CATTGCTCAT CTCATTTCTC AAGTAACCTT 120
CATGGTAAAA TTTAAAAATG CATTCCTCTG TTGTTATGAG TGCAAGCCTG TGGTTTCCTG 180
CAGTCACCAT GTGCACCAGC ACACCACCAC TCTGGAATGC AGAAGCACTG CATTGGTTTT 240
CCTCAGTGCA CTTCTTTCTT ACGGGGTCAC ATTTTTCTAC AGCATTTAGA ACACACCTTG 300
ACTGTTACAT TAGTGTTCCA CTTTAAAACT GCATTCCAAA GCTAGGAAAG CATTACACTC 360
ATGCTGTATC TTTATCCCCC CCCCTCTCTT TCTTTCTTTT TCTTACTGCA GTGATTTCCC 420
TTAAATTATT TCACAGTGAA GATTGTTTTT GGAAGGTGTG AGAGGGAGTC TATGTCAATG 480
TCTGGCACCT GTGTGCAGGT TTTCAGGAAG ACAGAAGAGA GCATCCGAGT CCCTGGAGCT 540
GGAGTTACAG GCAGCTGTGA GGCACCTGAT GCAGATATTA GGAAGGGACC TAAGGTCCTG 600
CAAGAACAAC AAGCTCCCTT ATCCACCTTT CAGGCTCCAG TTCAGGGTCT TTTGTGAGAA 660
CAGGCACCTG TTTCCTGACA GTTGTTTCTC CAAGTTGCAG GGCTCCTGTG TAGCTGAGGG 720
ATATTCTCTT TGGATGCTCC TGGTCCTTCC TCTCCTGCTC CTGGTTTCCT AACCCCATGC 780
AACCCAAGGG TCATCTCAAA ATGTCCCCCT CCCCTCACTG TTCTCTACCC AATCTCTCAG 840
CCAGGTCTTG CATGGGAGGA GCTTCAGGCT CTAAAGGCTG GGAGGGAACT CAGCAGGGTG 900
TGGCCAGGCT GGGTTCCTGG GTGGAGCTGA CTAGTTGCAG GAAGAGGAGA CACTTCAACA 960
GCCACCCTGA CACCACAGCC CAGGGGCTGG TTACTTGCTT CTGTCTCCAG CAGCCACACA 1020
AGCACCATGA AGAGGCTGCT GTGCTCTCTG CTGGGGCTTC TGTGCACCCA GGTTTGCTGT 1080
GAGTCTGGGT GTCCTCACCT GAGAGGCACC TGAGAGGGCA CCTGAGAGGA TCTGGCTCAG 1140
CACATGGAGG GGTGGGGAGA GCAGCTCAGG AGTCCTGCAG AGCTCCCACC TTCTCAGAGG 1200
ATATGGGTGT GCTCAGGGCT CTGTGGACAC TGCAGTGACA GCCATCTGTG TCTCTTTCTC 1260
TGTTTCTAAT CAGGGGTGAA AGGACAGCAA GTGCAGCAGA GCCCCGCGTC CTTGGTTCTG 1320
CAGGAGGGGG AGAACGCAGA GCTGCAGTGT AACTTTTCCT CCACAGCAAC CCAGCTGCAG 1380
TGGTTTTACC AAAGTCCTGG GGGAAGCCTC GTCAGCCTGT TGTCCAATCC TTCTGGGACA 1440
AAGCACACTG GAAGACTGAC ATCCACCACA GTCACTAAGG AACGTCGCAG CTCTTTGCAC 1500
ATTTCCTCCT CCCAGACAAC AGACTCAGGC ACTTATCTCT GTGCTATAGA TCCACAGTGC 1560
TCCCCACACA CCTGCAGCCT GTACACAAAC CTACAGCTGG GTGGGTGAGT CCCTTACAAG 1620
TCACAAGAAA TCAGAGAGTC CCAAAGAACA TCTGCCTGGC TTAATATCCC TTTCTTGTAT 1680
TTGTAGAGTT TTAACTTCAG GTAAGCTTTG GCCTAGTAGG TTCAGGACTT GGGTCTTTAT 1740
CTTCATTTCT CAATACATAG TTCTTCCTGA GACATAAATG TCCATTCTAG AACTAGCAGA 1800
GAAGCTGGCA GGAGGATTGA ATCAAGGTGA TCATTTAAGC AGTCTGTGCA GAAACGGCTG 1860
CTGAGCTCTC TGCTGGGGCT CCTGTGCTGT GAGTCTTTGA GGTTTGTGAG GTTTGCTGTG 1920
AGTCTGGCTC TCAGCATTCA GGGCACCTAA GAGGATCAGG CTCAACACAT GGAGGGGTGG 1980
GGAGAGCAGC TCAGGAGTCC TGCAGAGCTC CCACCTTCTC AGAAGACATG GGGGTGTTCC 2040
GGGCTCTGTG GACACTGCAG TGACAGCCAT CTGTGTCTCT AAAGTATGAA AAAGTACTCA 2100
AACAGATATT GTTATTTGAA CAATATATAT 2130