EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-02498

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr11:98553270-98554690

Target genes

Number: 26
Name	Ensembl ID

Gm11604	ENSMUSG00000085897
Ppp1r1b	ENSMUSG00000061718
Stard3	ENSMUSG00000018167
Gm12352	ENSMUSG00000084835
1810046J19Rik	ENSMUSG00000002580
Grb7	ENSMUSG00000019312
U2	ENSMUSG00000084621
Ikzf3	ENSMUSG00000018168
Zpbp2	ENSMUSG00000017195
Ormdl3	ENSMUSG00000038150
Gm12355	ENSMUSG00000078134
Psmd3	ENSMUSG00000017221
Gm12356	ENSMUSG00000085955
Csf3	ENSMUSG00000038067
SNORD124	ENSMUSG00000088169
Med24	ENSMUSG00000017210
Thra	ENSMUSG00000058756
Nr1d1	ENSMUSG00000020889
Msl1	ENSMUSG00000052915
Casc3	ENSMUSG00000078676
Gm12359	ENSMUSG00000075576
Cdc6	ENSMUSG00000017499
Rara	ENSMUSG00000037992
SNORA42	ENSMUSG00000077285
Top2a	ENSMUSG00000020914
Igfbp4	ENSMUSG00000017493

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ZNF263	MA0528.1	chr11:98553372-98553393	CTTCTCCCCTCCCCCTGCCCC	-	6.26
ZNF263	MA0528.1	chr11:98553794-98553815	GGAGGATTAGGAGGAGGATGG	+	6.44
ZNF263	MA0528.1	chr11:98553803-98553824	GGAGGAGGATGGGGGGATAAA	+	6.59

Enhancer Sequence

GCTGGTCATG AGTCTTGGCC AGTGTTCAGT GATGAAGCCT GGGACGGTAG AAGGGGAGTG 60
TGTGTGTTCA AGGAGAGGGT CTGTGTGGTG TGTTGTCGCT GTCTTCTCCC CTCCCCCTGC 120
CCCCTCACAG CTTATTAAAA CACAGGTATA GTGGGGCATG GGGCCATAGC TGTACACCTA 180
GGCACTCAGG AAGCCCAGGC AAGAGCAGTG CACAGTTGAG GCAACTGGAC TGTTGACCTG 240
TTGCTAAAGA AACGTGTGGT GTGTCTGTGT GCCTGTCTGT CTCCCTCCTG CCCACCCCCC 300
CAAGACACAG TCTCGCTGTC TATCCCTGGC TAGCCTGGAG CTAACTGTAT AGACCAAGCT 360
AGCCTCTGCC TCCCAAATGC TAGGATTAAA GGGGGGTGCC CCGGTGTCTG CAGTTGCACT 420
GTTTCTGGGG CGCCAGTGCT GCTGCCCGTC AAGAACTGAC TCCACTAATG CAGCAGCCTC 480
TCCTCCATAA ACCGTAAAAG ACATAAATTT TGGAAGCAGA TCTGGGAGGA TTAGGAGGAG 540
GATGGGGGGA TAAATATAAT CAAAATAAAG AAATGATAAA ACTATAAAGT AAGCAGAAGC 600
ACATATATTG GACCAGGCTT CATGGTACAG GTCCTATTCC AGCACATGGG AAACTGAGGT 660
AGGATTGTTT CTAATCTGTA GCAAGTACAG GGCTAATGCA GGGCTAACTT GAGCTATATA 720
ACCTAGACTG TATAAGGAAA CCCTGGGTTT TTTGAAAAGG CAAACGTATA TTTGTTCCCT 780
TTCCACTTCT GAGGTGCAAA GCCTACCAGG AGTCTTCCTG GACTAACATC ACAGCAGGGC 840
CGGGCTGGGC TCTCCTGGAG CCCCTGGGGA GGGTCTGAAG GCTCCCCTTA AATATCAGCA 900
TCCTGACACG CACTGACGGG CCACTCCAGC CTCCACTTCT CTCTCCCTCT CACTTTTTGG 960
TGTGTATGTT GTCTGTCTGT GTCTGTGTGT GTGTGAGAGA GAGAGAGGAT CTCCAAGAAC 1020
TCACATGTAG ATAGGCTGGC CTCAGACTTA CAGATCCACC TGTCTCTGCT TCTCGAGAGC 1080
TAGGCTTAAG GGTGTGTGCC ATGGATTTGT GGGTTTCCAC AAAGACCAAA GCGGGTATCA 1140
GATCTACTTG AGCTGGAGTC ACAGGGCAGT TGTAAGCCAC CATTTGGGTT CTGGGGACCA 1200
AACTCCTGTC CTCTGCAAGA GCAGCAGATA TTTATTAACT CCTGAGCCTT CGCTGCGCCC 1260
TCTCTCCCTT TTAAATGTAG TTTGCCTGCC TGCTGACTGT GTGTGCATCC CAGCCTGCCT 1320
CCCTCCCTCC GTCGTCCTTG CTATGTCTGA TCAGAGCCCA GGCACCGTTT TTTCCCTTGC 1380
CCACGGATGT GCCCCGCCCA CTGTGCTCCT GTCACGCCCC 1420