EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

TagContent
EnhancerAtlas ID
MM023-01336 
Organism
Mus musculus 
Tissue/cell
CD4+CD8+ 
Coordinate
chr10:79445610-79446650 
Target genes
Number: 38             
NameEnsembl ID
Ptbp1ENSMUSG00000006498
E130317F20RikENSMUSG00000091994
Gm17134ENSMUSG00000090860
ElaneENSMUSG00000020125
Med16ENSMUSG00000013833
Kiss1rENSMUSG00000035773
C030046I01RikENSMUSG00000035781
Arid3aENSMUSG00000019564
Wdr18ENSMUSG00000035754
ORF61ENSMUSG00000013858
Cnn2ENSMUSG00000004665
Abca7ENSMUSG00000035722
Hmha1ENSMUSG00000035697
Polr2eENSMUSG00000004667
Gpx4ENSMUSG00000075706
Sbno2ENSMUSG00000035673
Stk11ENSMUSG00000003068
Atp5dENSMUSG00000003072
DosENSMUSG00000035640
MidnENSMUSG00000035621
CirbpENSMUSG00000045193
1600002K03RikENSMUSG00000035595
Efna2ENSMUSG00000003070
Mum1ENSMUSG00000020156
Ndufs7ENSMUSG00000020153
GamtENSMUSG00000020150
Dazap1ENSMUSG00000069565
Gm15122ENSMUSG00000087672
Rps15ENSMUSG00000063457
2310011J03RikENSMUSG00000020133
Mbd3ENSMUSG00000035478
Uqcr11ENSMUSG00000020163
Tcf3ENSMUSG00000020167
Rexo1ENSMUSG00000047417
Csnk1g2ENSMUSG00000003345
Mknk2ENSMUSG00000020190
Mob3aENSMUSG00000003348
Ap3d1ENSMUSG00000020198
TF binding sites/motifs
Number: 11             
TFJASPAR IDCoordinateMotif SequenceStrand-Log10(p-value)
EWSR1-FLI1MA0149.1chr10:79445705-79445723GGAGGGCAGGAAGGAAGA+7
NR2C2MA0504.1chr10:79446617-79446632TGGGGTCAGGGGTCA+6.67
NR2C2MA0504.1chr10:79446631-79446646AGAGGTCAGGGGTCA+7.19
NR2C2MA0504.1chr10:79446624-79446639AGGGGTCAGAGGTCA+9.03
Nr2f6MA0677.1chr10:79446625-79446639GGGGTCAGAGGTCA+7.03
RXRBMA0855.1chr10:79446618-79446632GGGGTCAGGGGTCA+6.04
RXRBMA0855.1chr10:79446625-79446639GGGGTCAGAGGTCA+7.06
RXRGMA0856.1chr10:79446618-79446632GGGGTCAGGGGTCA+6.1
RXRGMA0856.1chr10:79446632-79446646GAGGTCAGGGGTCA+6
RXRGMA0856.1chr10:79446625-79446639GGGGTCAGAGGTCA+7.01
RxraMA0512.2chr10:79446625-79446639GGGGTCAGAGGTCA+6.98
Number of super-enhancer constituents: 5             
IDCoordinateTissue/cell
mSE_03404chr10:79445313-79453117Bone_Marrow
mSE_06348chr10:79445348-79451828E14.5_Liver
mSE_07798chr10:79445937-79453081Intestine
mSE_09619chr10:79446247-79454263MEF
mSE_12142chr10:79446084-79453231Spleen
Enhancer Sequence
TTATCCCAGT TAAGAAAGAG GATAAGGTCT ACTGTCATCC AGCCGACCCT GTCTCTGACT 60
AGACATTGGG CACCCACCCG GAGCCCTGAG GGTGTGGAGG GCAGGAAGGA AGATGGAGCA 120
TGGGCTCATC TGCAGCCAAT GAACTGGGGC CTGAGGGGAT GCCCACAGCT GTCTTGAGCT 180
CAAGCTAGAT CTACCTATGA AACCCCCGAA CGCTCAGTTC TGAGAAGCAC CAGGAGTGAG 240
TCCCAAACTC ACCAATGCCC TCCAATATCA GCATGCCAGC CACCAAGCCA TGACCCCAAC 300
ACCAGAAGGC CCAGGCAGCT CCTCAGAGAG AGCCTGGTGC CATCCCTCGA GTAGCCTTTG 360
TGACCGAGAA CCGGGATCTC CCGGGAGCAC ATGAAGAAGA CACAGCCAGG GCAGGTGCTG 420
GCTGTAGAGG TCCCTGGCCA ATCTGGCTGT GACTCTGTGG CTGACCCTAG TGAGATGACC 480
TCACCCAAAG CCACAGAAAA CCTGGCAAGA GTCTGAAAAC AGTGAAGTAA CAGAAAATTT 540
GAGCAGTGAC ACTGGGGGGT AGGGGGCTGT CCCCAGGGGG TTGGTTCAGG GTGTGCTGGA 600
ATGGGACTGA CTAGTAGAGA CTGGACTGAG AGAATCAGGG TAGAATAGAA ATGACAGGCG 660
GGACAGGGCC TCCAGCACAG GAGGTGGTCT ACAGTGGAAA GTCAGGAATG GAATGGAAAT 720
GACCATATTG TTCTCAGTGG AGGTGCAGGA CAGGATGGGA GTGACAGGTG GGAAGGTGGA 780
CCTCGAGTCC AAAATCCTAC TCCAAGAGGA CACTGGGCTC TGGTCTTGAG TGGAAAAATT 840
TGGGGCCTAG GCTCCCAAGT GGCAGACTGA GGCCAAAGGG CAGGAGGCGG GGCCTGAGAG 900
CTGAGGAAGT GAGGACCAGA GATAGCATCT GTAAGAGTGG TATCAGGGTA TCCAGGCGTC 960
AGGAGCCAAG TGGTAAAGTT GCCGGGGGTG GGCGAGCGGA TGACAGCTGG GGTCAGGGGT 1020
CAGAGGTCAG GGGTCAGAGG 1040