EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-00342

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr1:85179460-85180710

Target genes

Number: 14
Name	Ensembl ID

Trip12	ENSMUSG00000026219
Rpl19	ENSMUSG00000064281
Gm7582	ENSMUSG00000061852
A530040E14Rik	ENSMUSG00000072109
A530032D15Rik	ENSMUSG00000089844
Gm16038	ENSMUSG00000090128
Gm6264	ENSMUSG00000089716
Gm7609	ENSMUSG00000079457
Gm16028	ENSMUSG00000090252
Gm16026	ENSMUSG00000079455
C130026I21Rik	ENSMUSG00000052477
Gm16025	ENSMUSG00000089652
Gm2619	ENSMUSG00000091199
Gm7281	ENSMUSG00000089937

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

LMX1B	MA0703.2	chr1:85180517-85180528	GATTTAATTAA	+	6.02
Nr2f6(var.2)	MA0728.1	chr1:85179512-85179527	GAGGTCATAAGTTCA	+	6.42
RARA	MA0729.1	chr1:85179512-85179530	GAGGTCATAAGTTCAATT	+	8.92
Rarb	MA0857.1	chr1:85179511-85179527	AGAGGTCATAAGTTCA	+	7.24

Enhancer Sequence

TTCAAGGGCT GGAGAGATGG CTCAGTGGTT AAGAGCACTG ACTGCTCTTC CAGAGGTCAT 60
AAGTTCAATT CCCAGCAACC ACATGGTGGC TCACAACCAT CTGTAATAGA ATCTGATGCC 120
CTCTTCTGGT GTGTCTGAAA ACAGCTACAG TGTGCTCATA TAAATATAAC TAATAAATCT 180
TAAAAAAAAA AAAGAATAAG GACATTCAAA CAGAGTTCCA ACGAGGGCCC CTGTGAAGAT 240
ATAGGGAGTG TGCTGTGTGT TTGGCATAAC CCATCCTTTA AGGTTTGTAA ATGTAGCTTT 300
TATTTGCTTG AAGTAATTGT CATCTCCGAG GTTTACTGCC TCTGATGCTA ACCTAAGCCT 360
AGGCCTAGAA ACTTCTAGCC TCTGTACAAT CTTGTCTAGG CCTGGAATGT GTTCAGCCTC 420
TGAGGCTTAC TGCTGATTAA GCTCATCCTT TCTACTGCTT TCTGAACTGT GGCTGGTTCG 480
ACTCAGCTGT TCTGGCTCAA AGTCCTTTTC AAGCTGGCTG ATTCAATCTG GCTTATCTCA 540
GTTTCTCCTG AATTGTTCTG CTTGGCCTCA TGCTAACTTT GGCAATCTGT TCTAATCTTG 600
CTCCTTCTCA TTCTCTGGCG CATTCTGTCC TCACCTGTGT CTGGCTTGTT CTCTCTTCAA 660
CTGGTGTCTG TAAAGCTCTC CTGGTAGAAC TGCCTCCTTC TCTTTTGTTT TCCTCTCACT 720
GCACTGCCCC TTAAGTAGCT CCCCTTCCCT CTCTCTTCTC CTGAGAGCTG GGCAGATCCT 780
ATTCTGTCAC ATCTTTTTCT GATTTGTCAC TTTATCTGCC ACTCAATTAG ACATCACTTT 840
CAAACACTGG TGCTTCCTTC TACAATCTAA CTTCACCTTC ACTGTTTGGG ATTAAAGGTG 900
CGTACTAAGG GTATATCTGT ATTCTAGCCA GAGGGATTAA AGTGTGTCCT AAGAGCTGAG 960
CCACACTAGA TCTAGAAACA AGTTTTTTTC AGTAAATAAC ACAATCCCAG GGTTCACAGT 1020
GTTAACAAAT ATCCTGCAAC AGAGGTTGTT GGTGCAGGAT TTAATTAATG CCACTGTAAT 1080
TACCCCAAAT CCAAAATTCA GACAAGAAAT CAGTTATACC CTTGAAGTTA GAAATGGCAG 1140
TTGAAGACAA AACATCTTGG CAAAAGCTTT AATCTCAGAA CTTCGGATTC AGAGATAGGA 1200
AGATTTCTGT GTTTTCACGG CTAGCCTGAT CTAAATAGCA AGTTCCAAGA 1250