EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM023-00116

Organism

Mus musculus

Tissue/cell

CD4+CD8+

Coordinate

chr1:39973970-39976120

Target genes

Number: 4
Name	Ensembl ID

Snord89	ENSMUSG00000077704
Gm3646	ENSMUSG00000091937
Map4k4	ENSMUSG00000026074
Il1r2	ENSMUSG00000026073

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr1:39974637-39974652	AGAGGTCAGGGGTCA	+	7.19
PKNOX1	MA0782.1	chr1:39975886-39975898	TGATAGCTGTCA	-	6.27
RXRG	MA0856.1	chr1:39974638-39974652	GAGGTCAGGGGTCA	+	6
SCRT2	MA0744.1	chr1:39976032-39976045	TCACCTGTTGCTT	-	6.44

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01170	chr1:39953283-40014004	Th_Cells
mSE_12475	chr1:39974216-39975869	Spleen

Enhancer Sequence

ATATTGTTTG CTTTACCAAT GTTATTCTAA CCTGTCAGTC TTGCATAGTT TTTAGTAGTC 60
TTACTGTTCT CTGTGTGCTA CGACTTCCAG AATGTTAGTC TTTCAGTAGA TGCCACTTGC 120
CATGAATTTT ACTGTGTTTT AGTGCTGTGG TGGTGGTTGT TGTTATTACT ATTATTACTG 180
TTACTCTTAT TATTATTATT ATTCCTGTAA GTATTCTTGA AGTTTGTCTG AGAGACAGTT 240
CAGTTATGTA GGAGAAAGCC AGTTTATCAT TGAGGACCCA TTTCTCTGTT TTTTTTAGTA 300
GGACTTAGCA TTGGTGAGTG TCTCTGGCAC TAGCTTAGTG TCTGGTGAGC TCTGCAGTCA 360
GTATGTGAGT ATGCGAGTAC TGGCTTTGTT CCTTCATCTC TTTTCTGTAC ATGTTTTGTC 420
TCTGCCTTAG ATAGTTTCCT TATATACATG TGTTGATTTG TACTTGCTGA ACTCAGGCAG 480
GCCCCCTTTT AGACCTTGGG TTCCTCATGT CTGGGCAGCC TCTGTATTCC AATTTTACCT 540
CTGGTTTCTC AATCTACCCA GCCTCTCAGC TCTTCCTCAC TGAGGGAGCA GGCTGGTCTT 600
TGCTTTGGTT TCTTTCTTCT TGAGTCATGG CTTGAAGGTT TGAAGGGAGC CAGTAGACCT 660
AGCAACCAGA GGTCAGGGGT CAGTCTGCCT TTCACTTGTG TGATGCCTAG TCTCCCCTTC 720
TGCCCCTTTT CCTTTCTCCG AGTTGAAAAC AACTTGGTGT GTGTGTGTGT GTGTGTGGTT 780
CATATGCAGA TGCAGATGTG TAGGGCTGTG GTTCTCAGCA TGTCAGATCT CCTGCACATC 840
AAATGGTTAT GTTACGATTC ACTGCAGAAT GAGGATGTGT GGTAAAGGGT TGCAGTGTGA 900
GGAAGGCTGA GAGCCGCTGG TTTGAGGCGA GCATAGCATC AGTGCCTACC TCTGTAAGTC 960
TCCTCCTGGT CTTTTGAGGC GTAGTCTCCC CTGAATCAAG CCGCAGTGCC GAGGCGGCAC 1020
AGTGCTGATG TGGGCGGTGA TGCCTGGCTT GTTCCATGGG CGCTGTGATC TGAAATCTGG 1080
TCTCTTAACC AAGCCATTTC TTCAGACCTT CTCCTGAAGT CAGATCTTGT GTAGTTTGGC 1140
TTTGAGCTCC TCCTCTCTCA GCCTCCTGGG TGTGGGATGT GAGGTGTGTC TTGCCACATC 1200
TGGTCTCACT GCTGGCTGGT CGGAACGTTG ATGCAAACTC AGAGCTCTGC CTGCCGGTAA 1260
TGGGGTTAAA GGTGTTCACC AACATGCCCA GCAACTCCTC TGTTTTTGAT GGTAGTAGTG 1320
ACATGTAGAA GAGACATCTT AACTTTAGAA AGAGCTTTGT CTTAGGTTTT GTTTGCCTGT 1380
TTGTAACAGT GCTTCTCTGT GTAGCCCTGG CTGTCTTGGA ACTCACTCTG TAGACCTGGC 1440
TGGGTTTTAG TGTGTTCAGA GTTCCACCGC CAATCAATCT GGTGACATCC TTCACACAGA 1500
CCCATGTCCT GGTCCTTCTA GTGTCTGACA GCTGCACCTT AGCCCTCTGC CTTTTGTTGC 1560
TGGAGGTGCT CTAGGCATTT CCTGTAAGTG GAAGCACACA GTGACTGTCT TTGTTCAGCC 1620
TGATGTCTTC AGGGTTCAAG CATGTTGTAG TGGGTGTCAG TACCTTATGT CCCCCTTTGT 1680
GTAGTCATGT TCCATTGAGT AGCTATTCAC CATACACTGG CTCATCAGCT AATGTTTCCC 1740
TTTGAGCTCC TAGGGTTGAC GCTGCTGTGG GCATGTGTGT GCAGTTCCTG TGTAGACTTT 1800
TGGGGCTGTA GGAATCTGTG CTAACTGACT TTTTGAGGAA CTGCAGAGCG GGTAGTTTCG 1860
TGACACTCCC ACAGCAGTTT AGGAATGTAC GCTTTTTACA TCCTTGCCAA TGCGTGTGAT 1920
AGCTGTCATT CTTCATAATG GGCATGGTTG TTATCTGTCC TGTGGTGTTG ATTTGAATGT 1980
CTCTGACGAC TAATGACAGT GAGCATGTCT TCACTTGCTT TTGGCCTTTT GAGTATTTTT 2040
ATGGGAGTGT TTTTCAAGTC TTTCACCTGT TGCTTAAGTT GAGTGATATT ATGAGTTACG 2100
AATTTTCTGC CTAAGTATTC TCTGTTTGTC CAAGCTGCTG GGTCTATAAT 2150