EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM022-16658

Organism

Mus musculus

Tissue/cell

CD4+

Coordinate

chr7:20157380-20158650

Target genes

Number: 16
Name	Ensembl ID

Vasp	ENSMUSG00000030403
Fosb	ENSMUSG00000003545
Klc3	ENSMUSG00000040714
Ckm	ENSMUSG00000030399
Mark4	ENSMUSG00000030397
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Nkpd1	ENSMUSG00000060621
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Clasrp	ENSMUSG00000061028
Relb	ENSMUSG00000002983
Clptm1	ENSMUSG00000002981
Apoc4	ENSMUSG00000074336
Tomm40	ENSMUSG00000002984

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr7:20158127-20158142	CAGTTCAAGGCCAGC	+	7.26
Pou2f3	MA0627.1	chr7:20158356-20158372	TCCTATGCAAATTCGC	+	6.16
ZNF263	MA0528.1	chr7:20157757-20157778	CCTTCCCCATCTCCCTCATTC	-	6.39

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_10435

chr7:20156593-20163230

Embryonic_stem_cells

Enhancer Sequence

TTGAAGGGAA GCTAGCCAGT TCTGGTGTGG TGAAAGTGGC TCTGGCAGGC CTTGCGCCCT 60
ATTCCCTCCG CCTTGAGAAA AAGTGTTTGA TTACATTCCT AAAGCTAGCC ACCAAGGTCT 120
ACTCCCTTAT TTGGATACTT CCTCCTGAGG CTGAATACCA AGGTAGAATT ATCACAGTAT 180
TGAAGTCCAG CAACCAAAAG CCCCCTTTGG CCCACCTAAT TAACACACTT ATTTAAAATT 240
AAACACCTCA CCCTAACACA GGGTTTCTCC TTGTGTCTTT ATAAATTGCC ATTTTTCTAT 300
GGGTCAAGTC TGTCTCCTCT TTATCCATTG GCAGTCCTTT GTTCCTCTGG GATACTCCTC 360
CTCCTTCTCC CTTGTTCCCT TCCCCATCTC CCTCATTCTC TATTTCCTGT CTTTGTCTCT 420
AATTCCCTGT TCTCTGTCCT TCTGGGGCAA ATGAATCTCC TTTGTGCTGA GCACTTGTCC 480
TGGAGGTTCT GGGCAGGTAC TTTTCCTTTC AGTCTTAGCT ACAGAGAGAG TTCTACAGCA 540
GCCTGAACTA CATAGGGAGA GGTGTGGGGT TTATAGGGGT GGGAGAGGCT GGAGATGTAG 600
CTCAATCGGT AGAGTGCTTG TACCGAAAGT AGGAAATGGA CATCCTTCAC CAGTTTAACA 660
TAAACTGCTG GTAGCAGTTC GTACAGGCCT CTAATCTCGG CCCTTGGAAG GTGAAGGCGG 720
GATGTAAAGT TCAAAGTTAC CCAGGGCCAG TTCAAGGCCA GCCTGGGGCT ACTGTTCTGC 780
CTGATAATCT CAGGGGAAAA CAAAACAAAA CAAAACCCAG ACAACAAGAA GAAAGTTAAA 840
GAGGAATGGG TCAGTTTGGA GACCATTAGG TCTACCTTGA GTTACCAGGA TGCGAAACTT 900
GCTGGGCTTC CAGGCTAGCA GATAGGGCCA ATTTCTCCAT TCGCATTGTA AAGTAACAGT 960
CCGCAGTCCT CCCACCTCCT ATGCAAATTC GCTAAATGGG GCCACACCTG AGCGTAAGCA 1020
GCCCGAGGGC AGGATCTGTT CCCTCCGCGG CACCCGTGGG CGGGCGGGTC AGTTTCCTTT 1080
TAATTCCTCC TGGCCTCCTA GCGTCCTGCT TTTCAAATTC TAAGAATGTC CATCCGCTCC 1140
GGGGCAGCCA CCTCCCACCC CGCCCGCCCC TCCCTGCGTC AGAGTACAGT CTCTCTCCAG 1200
GCCGTCCCTT CCCCAAAGCT CCAATGCCAC CCGGAGCGGC TGACGGGGAA GATGTCCCAC 1260
GACCACGGAG 1270