EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM022-15642

Organism

Mus musculus

Tissue/cell

CD4+

Coordinate

chr6:48735040-48735880

Target genes

Number: 17
Name	Ensembl ID

Gm7887	ENSMUSG00000044211
Atp6v0e2	ENSMUSG00000039347
Lrrc61	ENSMUSG00000073096
Rarres2	ENSMUSG00000009281
Gm5111	ENSMUSG00000052730
Repin1	ENSMUSG00000052751
Zfp775	ENSMUSG00000007216
AI854703	ENSMUSG00000053297
Gimap8	ENSMUSG00000064262
Gimap9	ENSMUSG00000051124
Gimap4	ENSMUSG00000054435
Gimap6	ENSMUSG00000047867
Gimap1	ENSMUSG00000090019
Gimap7	ENSMUSG00000043931
Gimap5	ENSMUSG00000043505
Gimap3	ENSMUSG00000039264
Tmem176b	ENSMUSG00000029810

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

PHOX2A	MA0713.1	chr6:48735597-48735608	TAATTCAATTA	+	6.14
Phox2b	MA0681.1	chr6:48735597-48735608	TAATTCAATTA	+	6.14
Rarb(var.2)	MA0858.1	chr6:48735351-48735368	TGACCGTGCTTTGACCT	-	6.17

Enhancer Sequence

CCTAATACTC CTCCTGACAT CACTCACAAT TGGACCATAA ATCTGATGTG CTACAAATCT 60
TGCTACTAGC AAATAGAAAG CACTAAGATA CTTGTCTTCC ACTGGCATGA GGAGCCCATA 120
TATGACAGAC AGAAATGAAT GTTTCCCAAC AAGGATCAAA AAGGGCCACA TAAGACAATG 180
AATAAAGGAT AGCTGAGTGT GGCTGCACTT TAAGAACAGA AGCTATCTTG TTACAGGGTC 240
AAAATAAGTT CCTCTCTGTT TACTGTGAAT TTTAAGTTTC TGATTCCTGG AATTTGACTT 300
GTTCCACATC CTGACCGTGC TTTGACCTCT ACCATCTACA AAACCAAAAG ATGTTCTGTC 360
AAGTATTCTT AAACTGCTTT AGTATTTTGC TTGCCAAGCT CTTTTGGAGG TCCTCCAAGC 420
CTTGGATATC CCTAGCATTG TGGTTTTGAG CTATAAGCCC TTGCATCCTC TGTGTTTGGA 480
CTTGTTCTCT GGAATCCTAC CTTAGGCAGA GACAGCAGCA GTACTGGCTT TGCTGTGCAC 540
AGAAGTAAAA CTTGCTTTAA TTCAATTAAT AAAGATCAAT GGTCTTTGCT TTAATTTGGT 600
GGGATCAACA GACATCGTAC TATGTTGGTC ATTTGATGGT TAATAGGCAT GATAATGGAT 660
TGCTTCCTTC AATTGGCAGC TTCTATAAAC ATGACAGGAT TTAGTGTCCA AATTCTCTAA 720
GTCTTGTGGC CAAAGTACTT GGTTTTTTTA GCAATAGGAC ATTATTCTAG ATGTTAGGAA 780
CAGAGCCAGG CATGGAAGTC CTTGATCTAA TCAACTGAGA AAAGAGAAGT TATTTGAGTT 840