EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM022-13436

Organism

Mus musculus

Tissue/cell

CD4+

Coordinate

chr4:120403380-120404680

Target genes

Number: 9
Name	Ensembl ID

Ctps	ENSMUSG00000028633
Cited4	ENSMUSG00000070803
Kcnq4	ENSMUSG00000028631
Nfyc	ENSMUSG00000032897
Dem1	ENSMUSG00000028629
Zfp69	ENSMUSG00000064141
Smap2	ENSMUSG00000032870
Zmpste24	ENSMUSG00000043207
Gm12882	ENSMUSG00000081423

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr4:120403751-120403761	GGGGCGGGGC	-	6.02
SP1	MA0079.4	chr4:120403721-120403736	AAGGGGCGTGGTTTG	-	6.47
SP4	MA0685.1	chr4:120403719-120403736	GGAAGGGGCGTGGTTTG	-	6.66

Enhancer Sequence

GCTCTGCGTT GACTGGTGGA CCTATGGCAC ATCATCTACC CCTATCTAGG ACTCAGTTTC 60
TCCCTCTCTC TAACAGGATC AGTGATCCCG GATGCTGCAG CCTGGAGGAA GGGGTCTTCT 120
GGCATGAAGC CTGAGCAAAG CTTGGGTTCA CCTGGGGACA CAGAAGGCTG ACACCAGGCG 180
GTCTCCTCGG GAGAGGAAAA TGTTCTTAGG GGAAGCTCCT TAGGGACCCC CTCTCCCGGC 240
GCAGCCTTTG GCCCAGGCCG GCTTTCTACC ACAAGGAATT CTACCGGTTC TAAGGTGCGA 300
GCCACCAGAC CCCAGATCCC GGCCTGGGCG AGGCATAGTG GAAGGGGCGT GGTTTGTGGG 360
CGGGGCAGTA TGGGGCGGGG CTTTGCCACT GCAAACTCCA GGAGCGGCGG CTCCTGTTAC 420
CTCCCCGCGG CCTCCCCGCC CGGCCGGCTT ATTTTTCGTT TCCAAATTAA CAATTGAAAA 480
TGCTGCGGCC TGAAAGGCGA GCAGCGGGCC AAGCGGAAAG TGTGAAGGTG CTGCCGCGTC 540
ACCGAGGCCG GGGGCGGAGA GAGTGCATTC AACACCCCGA CCGATCGCCC ACCCAAAAAG 600
GCCGACAGAG CGAGGGAAGA GGGGAAGAAC GACGGAATCT TGGCCTGTTG TAGCCTTCCT 660
AGTGCTGCTC TGGCCAGGGT CGCAGGACCC AGTTCTCAGG ATCGGGATGA TGCCAGCCCC 720
TGCGAGGACG AAGGGGGGAA AGAGGAGAGC GCGCTAGGGC TAGGTTTCCA CTCACAGGCT 780
GAGTGCCCAG GCAGGGCAGC AGGTGCCAGG CAGCACCTCA TAGCACCGTC CTTAAAGGCT 840
CCTAGTGTCA GGGAGTTTCA CGTGTGACCT CAAGCAAGTC ATTTCAGCTT GCCAAGACTC 900
GATGTCCTCA TCTGGAAAAT GGAGAGAAAA TAAGCACCTG CCAAATAGAT AAAGGAGGCT 960
GGCTCACTGA GAAACCTTTG TATAGCAGCT ATTTTCTGTG TTGTCAGTGA CGCGGTAGTA 1020
CTGAGTCCTA GATACCCCTC TTCCTCCCAC CATAGCCAAA GGTGCTGATC ACCCTCCTCG 1080
GGGCCTTCTT GGAGACCCCT GAGGCCAGGA AGATCCTGGT AAGGGGCTCA AAGACTAAGT 1140
GACTGGGAAG ACCTGGGCTC CTCCTACAAA GAGGGGTGGA GCCAGGCCCG CATCATGAAT 1200
ATCCTTGTTG CCCAGTGTAT GAGGGGTAAT AGATAGACTC TCTGTTCCTT GGCACCTAGG 1260
CACAGGGGAT AAACACTAGA GACAGGTTTT TATAGCCCTC 1300