EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM022-12283

Organism

Mus musculus

Tissue/cell

CD4+

Coordinate

chr3:89882370-89883440

Target genes

Number: 13
Name	Ensembl ID

She	ENSMUSG00000046280
Atp8b2	ENSMUSG00000060671
Hax1	ENSMUSG00000027944
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
Tpm3	ENSMUSG00000027940
Nup210l	ENSMUSG00000027939
Rps27	ENSMUSG00000090733
Jtb	ENSMUSG00000027937
Creb3l4	ENSMUSG00000027938
Slc39a1	ENSMUSG00000052310
Dennd4b	ENSMUSG00000042404
Slc27a3	ENSMUSG00000027932

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr3:89882901-89882912	ATGACCTTGAA	-	6.62
Esrrg	MA0643.1	chr3:89882901-89882911	ATGACCTTGA	-	6.02
Nr5a2	MA0505.1	chr3:89882900-89882915	GATGACCTTGAATTT	-	6.77
SP1	MA0079.4	chr3:89883373-89883388	CAAACCCCGCCCCCT	+	6.49
SP2	MA0516.2	chr3:89883372-89883389	CCAAACCCCGCCCCCTT	+	7.08
SP4	MA0685.1	chr3:89883373-89883390	CAAACCCCGCCCCCTTT	+	7.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07586

chr3:89882713-89888321

Intestine

Enhancer Sequence

AAAGACCTAG AGAAGCAAAG GGAAAACAAA ATAAACCTCT TTATAGTTGT GCTTCCAGAA 60
ATCCTGAATG GTAGGTCCTG TAGAAGTAGT TTTTAACTCA TTCTTTGGAG TACCTGAAAG 120
CCAAAGTAAA ACTAATGAAA GTTACTACAA TTTAGAGGTG AGATTCCACA ATCGTTTTGC 180
TGTTGCACCA AGGATATGTT AGAGGTGTAA ATATCTTGTC TACAAGAGGG ATTGCACACA 240
GATATTAAAT TACCAAGTCC TAAATCATTC CAGGGGTCAA AGAGGGTGAC ATGTTAACTG 300
CTCATTTGTA TGGAGTCTCT CAAAAGCTAC AGGAGAGAAG CTTGATATTC AAACAAAACA 360
CCTAAGTCCC GAGCTGATCC TAACAGAATG CCAACTTGCC CATCTCTTCC ATCTGGTAGT 420
TCCTTTATTG ACTTCCAGAT GGGAGAGAAC TGTCTCAACA GTTTTGGGGG TTGTTTTGAG 480
ACAGCGTTTT ATGTAGCTCA GACTAGCCTT AAATTCACCC TGTAGCCAAA GATGACCTTG 540
AATTTCTGCT CTTTCTGTCT CACCCACTAA GTACCGAATG GTACTTATGG ATACGTGCCA 600
CTAGGCTAGT TTAAGTGCTC CTGGAGATTC AGCCCAGGGC TTCGAATGTG CTTGGCTAGT 660
GCTTTACAAA CTGAGCAATA TCCACAGCTC CTCCTAATAG ATTTTCAAAG GACCTCACTG 720
GGACTCCTTG CAAGGTGAAG GCTAGAGTCT TCTGTCTAGG CTTGTCTCAG AACCTGGTTT 780
TGGAATCTGT CCTAGACTGA GTAGAAGTGG AAGCACATGG GATATTTTAA ATTGCGGAGC 840
GGGAGCAGAC GCAGTGGTAG GGAGGCACCG GATAAGAGAG GGGTCAACTG CGTAAGTGTT 900
CACGACAGCA CCATTTTAGT AAATGGGACA GCCATTGTTA CGAGACAGCC TGGTGGGTGA 960
GGCTAGACTA TGAAGCGCCT CTCAGTTACT ATGGTAGCCT TACCAAACCC CGCCCCCTTT 1020
ACTGGACTAA GGAAAGACGG CCCTGAGTGG TCGCCTAGGG TTACTGGGAG 1070