EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM022-03410

Organism

Mus musculus

Tissue/cell

CD4+

Coordinate

chr11:60623650-60624400

Target genes

Number: 12
Name	Ensembl ID

Llgl1	ENSMUSG00000020536
Flii	ENSMUSG00000002812
Smcr7	ENSMUSG00000018599
Top3a	ENSMUSG00000002814
Smcr8	ENSMUSG00000049323
Shmt1	ENSMUSG00000020534
Gm12618	ENSMUSG00000083394
Dhrs7b	ENSMUSG00000042569
Tmem11	ENSMUSG00000043284
Gm16515	ENSMUSG00000018931
Map2k3	ENSMUSG00000018932
Usp22	ENSMUSG00000042506

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr11:60624299-60624310	TTCAAGGTCAT	+	6.62
Esrrg	MA0643.1	chr11:60624300-60624310	TCAAGGTCAT	+	6.02
FOXP1	MA0481.2	chr11:60623878-60623890	TCCTGTTTACTT	-	6.07
Foxo1	MA0480.1	chr11:60623878-60623889	TCCTGTTTACT	+	6.32
Nr5a2	MA0505.1	chr11:60624296-60624311	AAGTTCAAGGTCATC	+	8.12

Enhancer Sequence

CAGAGCCCTG GCTGCTGAAC TGTCGTTTTT GAGCTAACTT TGGGGAAAAC ATACAGCATT 60
TCCTTATTAC TGTCTATAGG TCTGCCAAAG TCCATACCCA CGTGTTAGGC TGTAATGGGG 120
ACAGGAACAG TGCGAGTCTC TCTGTGCCCT GCTTTATAAA GAGAGGAGGC TCTCAAAGGC 180
CTTGGAGTGG CTTTAACTAA GGTCATATAA CAGAGGCAGA ATGTGAACTC CTGTTTACTT 240
TTGGTGCTTC CCAGAATCCT GGGTAACACA ATTACTCACC TCCATTCAAT TTCCCCTCAA 300
GGAAGAAATT TTAAATGTAT TCTGTACGGA GCCTAAACTG GTGTTTCTGG TCCAGCAACT 360
GCCTGGCTCA ATTAAACACA TTTGTGCTTG CTTCAGCTAA CCAAAGGTCA CCTAACTTCC 420
AGACCTTGAA ATAGAGGCAC TGGGCTAAGA ACGCTACAAG CCAACCTGTC CCCTAGATAG 480
AGTAACGCAC TGCAGATAAT CAGGGTTGTA CTAGTAAATC AAAAGCAGTG ATTACAGACA 540
AACCTCGGAA GCTTCGTTAA CATGTATAAA CCAAGGGGTT CCATCCCAGC ACCACATGAA 600
CCGAGAGCGA TAGCTCTTAC TGGTGAGGTG GAGGCAGAAC CATTAGAAGT TCAAGGTCAT 660
CCTTGGCTAC ACATCAAGTT CGAGGACAGC ATGTGTGACA CTCACACCTC AAACAAAACA 720
AAAAGAAACA ATCGCAAAGA TTAGAAATTA 750