EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM017-03069

Organism

Mus musculus

Tissue/cell

C3H10Thalf

Coordinate

chr19:41890770-41892120

Target genes

Number: 16
Name	Ensembl ID

AI606181	ENSMUSG00000074873
Slit1	ENSMUSG00000025020
Arhgap19	ENSMUSG00000025154
Frat1	ENSMUSG00000067199
Frat2	ENSMUSG00000047604
Rrp12	ENSMUSG00000035049
Pgam1	ENSMUSG00000011752
Exosc1	ENSMUSG00000034321
Zdhhc16	ENSMUSG00000025157
Mms19	ENSMUSG00000025159
Ubtd1	ENSMUSG00000025171
Hoga1	ENSMUSG00000025176
Morn4	ENSMUSG00000049670
Pi4k2a	ENSMUSG00000025178
Avpi1	ENSMUSG00000018821
Marveld1	ENSMUSG00000044345

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

IRF2	MA0051.1	chr19:41891296-41891314	CAAAAGCGAAAGCCAAGC	+	6.46
Mecom	MA0029.1	chr19:41891861-41891875	TAGATAAGATAAAG	+	6.25

Enhancer Sequence

AAGACACACA CACACACACA CAAACACACA CTTTTTAAAA GGAAGAGAGG GAAAGCAGGG 60
CACTAACACC CCATCCTGCT TTACCCCCAT GCACTGGGAG ATTGTCCTCC AGTGCCCCAG 120
ACTTACATAT CCCCATTCAT GGGGGTTATC TTCTTTCAAA GTGGTAAAGG AGAGAGTGGC 180
CTTACCCACT CCTTTACACT TCAGGGCAAA TTAAGTTCTA AAGTCCCTCC TCCGGAGTTC 240
AAAGGAGCAT CCTAATTATG AAGTGAACAC CTTGTCCCTG TCCCAGTCCC AGTAATTACA 300
CACAGTCCTT CCTTCGCACC AGGAAATAGG AACAGTCTCT GGAGACTCCG TCCTCGAGTG 360
CCAGGGTTCA TTTTACATTT GCTGCACTTC TAGGTCTGTT TATATGATTG TCTGTCTGAT 420
GGCAGAATCT CCCTAGGTTA AAGGCCAAGT TTGTTCGGCT TACTTAGCCA TTTATTTGAT 480
TAACAAGTGA ATTAAATCAA AGGACTTAAG GGTTAGCCAT GGAGCTCAAA AGCGAAAGCC 540
AAGCGTTCAT GAAAGTCTGG GGTGGATCTC CAGCAATGAA AGAAAAAAAA GTTAGCAAAA 600
TGAAACAATG TTTTTACTTA TGGAAAAAGC ACGTCCCATC CCCCATACTA GACCTGCTTC 660
TGTTTGCACC CAGCATCTTT TTAGGGGTCT CCACTCCTAT AGCCTCAATC CACGTGTTCT 720
GGGTAGGAAT GAAGCCATTG ACTCAAGCTG AACCAATCAC AAGGCTACCC CTGAACTGAA 780
GGATCCTACA GACTAGCCAA GCCCTAGTCA CTAGGCAAAC AAAGTGAGCC CAGAGAAGTA 840
AGTTGAGTGG GGGGAAGGGG CCAAGGCGGG GAGCAGAGAT CCGGGAAATG ATTGGTTGTT 900
GGCAAGAGCA GAGCCAGCTT CATGGAGAAT TTGTAGTTGG AATGGGTAGG ATTTCATTCT 960
CTGGAGACTG GACGAAGGCA TTTTCAACAC AAGGAGCGAA ACCATGCACA GAGGGACAGG 1020
AACATGTGAA CCACGTTTGG AAGCTGGCAT GGGCCCAAGA TGACCAGAGC AAAGAGATTC 1080
TGTGGGGGTA TTAGATAAGA TAAAGCTATG GATACCGTGT GGAGGGGCTA AGAGGGCTCC 1140
AGCAAGAGCC TGAACCTGCC CTGCATGGGA GCCTTCGGTA ACTTGAGCAG GCCTGGGCAG 1200
CTTGAACCGA TCTGTCAAGA GTGGATTAAA GGAAAGAGTC TGGGCTCGGA TACAAATGGC 1260
ACAAGGCTGG CCAAGGAAAT GCAAAGGGCA TAGGCAATGG GACAGAAATA GGGCAGGACT 1320
GCTGGCCAGA GCACCGGAGG AAACCGCCAT 1350