EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM017-02942

Organism

Mus musculus

Tissue/cell

C3H10Thalf

Coordinate

chr19:4810920-4811170

Target genes

Number: 25
Name	Ensembl ID

A930001C03Rik	ENSMUSG00000087132
Rhod	ENSMUSG00000041845
Lrfn4	ENSMUSG00000045045
Rce1	ENSMUSG00000024889
Rbm4b	ENSMUSG00000033760
Rbm14	ENSMUSG00000006456
Ccs	ENSMUSG00000034108
Ctsf	ENSMUSG00000083282
Actn3	ENSMUSG00000006457
Zdhhc24	ENSMUSG00000006463
Bbs1	ENSMUSG00000006464
Dpp3	ENSMUSG00000063904
Peli3	ENSMUSG00000024901
Mrpl11	ENSMUSG00000024902
Slc29a2	ENSMUSG00000024891
B3gnt1	ENSMUSG00000047379
Brms1	ENSMUSG00000080268
Rin1	ENSMUSG00000024883
Cd248	ENSMUSG00000056481
Tmem151a	ENSMUSG00000061451
Yif1a	ENSMUSG00000024875
Cnih2	ENSMUSG00000024873
Rab1b	ENSMUSG00000024870
Klc2	ENSMUSG00000024862
Pacs1	ENSMUSG00000024855

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr19:4811106-4811121	GAGGGGCGTGGCTAA	-	6.82
SP4	MA0685.1	chr19:4811104-4811121	GTGAGGGGCGTGGCTAA	-	6.53

Enhancer Sequence

CCCCAGCCCC GAGGCTTCGG CTTGCAGTGG CCACTGCACC CGCCCGGAAC CGACTCCTCC 60
CACTTGATGA ATGTTGCTGG GACCGCAGGG GAGAAGGGTG GCTCTACCCA ACTCGCCCCC 120
AGCACCTTAG GCCCCGCTCC TGCACACTTC CCCATCATTC CCAACCCTGA GGACCAACCC 180
CAGAGTGAGG GGCGTGGCTA AGAGGCAGAG AGCACCGCGC GTGTCCCCTC CCGAGCGCGC 240
TCCCGCGTTA 250