EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM017-00301

Organism

Mus musculus

Tissue/cell

C3H10Thalf

Coordinate

chr1:169322230-169323880

Target genes

Number: 4
Name	Ensembl ID

Uck2	ENSMUSG00000026558
Tmco1	ENSMUSG00000052428
Aldh9a1	ENSMUSG00000026687
Mgst3	ENSMUSG00000026688

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxq1	MA0040.1	chr1:169322681-169322692	AATAAACAATT	-	6.02
Myog	MA0500.1	chr1:169323504-169323515	AACAGCTGCAG	+	6.02
Nr5a2	MA0505.1	chr1:169322350-169322365	GCTGGCCTTGAATTA	-	6.2
Stat4	MA0518.1	chr1:169322781-169322795	CTTCCGGGAAACTG	+	6.15
Tcf12	MA0521.1	chr1:169323504-169323515	AACAGCTGCAG	+	6.62

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_06175

chr1:169316761-169325096

E14.5_Liver

Enhancer Sequence

TACTTATAAA GGAGTTCCTT TTCAGATTGT TTCCTCCGGA ACTCTACACA AGCAGGAGGG 60
AATCTAAGTG AGGGAAACTC TGCCCTTGTC CTTTAAACAA GGACTCAATA AATGGCCCAG 120
GCTGGCCTTG AATTACCATT CTCCTGCCCC AGGCTCTCTG GTGCTAGGAT TCCAGTTGCA 180
GGCCTCTGCA TCCAGCAAGA TTTTGTTCCT TAGTCTAAGG AAGCCCCAGT AGTTCAGTTT 240
CTATGGCTGG CCACACTATC CCTGTCATTT TATATATAGT AACACTGGTT AAAGGAAAAA 300
AAAAAAAAGA ATCACTTGAC AGAGTTTTCT ATTTCTGTAA CATTGTGTCA GGAAGAAGCT 360
GAGCAGAATG TACTTCCCAG GGTGAAAGCA CATGTTTGGA TTTCAGATGT TAGTTTTATT 420
TAACTCCTTA GATAAATTTA GCTCCTGTGA GAATAAACAA TTCTGGATCC CCTGACTCAA 480
GACAGTATAC TCTCATTATG GACACACTGA AAGAAAACAC ACCGGGTAAC CCTGACTAAT 540
AACCTTGGCT GCTTCCGGGA AACTGCAGTC TGCAGGTGCC CTACAGATTC CCGCAGGGAA 600
GCCCTGGTTT CTGCTACTAC CTTAAAATCT GCAGCAGACC CTGCAAGGCC ACACCTAAGC 660
CACCAGTACA GGCAACAGAG CAGAGAGCTG GTTGCTCTCT GGGGCACCTC CTTTCCCTAG 720
TTAAGGGATT CAAGTCCCAA CCCGCAGCGC AGCGTTGCTT TCCTACCCAT CCGACCATCT 780
GTCTCTGCTT TTCCTCTACT TCCTTTTCCG CACTGACTTG TACCCTAGGC TACTTGCAGA 840
CTGGTGCCTC CCAAGCAAAG AATTAACAGA AACCACAACC TCGGGAGTGA CTCAGTGTCT 900
CTTACTCCCT TCCACCACCC TGCAGGTGCC CCACCCTGTG GTTCTGGGTC TCCCTGTAGC 960
GACACAAGAT AAGTAAAGGG ACACTTGCGG ACATGTGAGT ATGGGATGAA TTAATATCCC 1020
ACTCACTCTT CCCAAGAAGT CTCTTGCTAT GAGGACAGAA GTAAGAAAAT GACCCATATT 1080
CAGGTATCAA TGCAAATATT TCTACGAGGC GAGAGGAAAA CAAATGCAAT TCCCTCTGAG 1140
ACCCTCTCGA AGGATCCTAG CAACAAGACA TCCATAGCAG GCGCGGCGCT TGCACGCCAC 1200
TTATGAAACC TGTGCTAGAT CAGGTACGAA TGGCCAGTTC CCACTGCAGA GTTCCGGGCT 1260
CCTTTCTCTG TATTAACAGC TGCAGTGAGT AAGGTCAGGT GGTCTCTTGA AGGCCGAAAG 1320
AGGGAGCCCC AGGTCTTTAC ACAATTGGAA TTAAGGAGGG GGAGGAAAAT AAGGAATTGA 1380
GGATGAGCTG ACCTTGAGAA CCTCCCTGAG TTAGAGATAG CGAGGTAGGG GCCTCCCCGA 1440
GAAGCTCCTA AGCTACACCA TCGGGGGGAG CATGCAGGGA GGGCGGAGGG CAGAGTGGGT 1500
AGAAATGCAG AGCTCAAATC GACCGATAAA GAAGGGAGGT TGGAGACCCC AATTCCGTTC 1560
CAAGTGACTG AGATACCGGT TGTGCATGTG CAGGCATTCA GGTGTCCCAG TGAAGCTAAA 1620
GCTCCTGCAG CTCGCAGCTG CCAGCACTTA 1650