EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM011-00049

Organism

Mus musculus

Tissue/cell

Brown_preadipocyte_E18.5

Coordinate

chr10:79565120-79565350

Target genes

Number: 30
Name	Ensembl ID

Rnf126	ENSMUSG00000035890
Fstl3	ENSMUSG00000020325
Ptbp1	ENSMUSG00000006498
BC005764	ENSMUSG00000035835
C030046I01Rik	ENSMUSG00000035781
Arid3a	ENSMUSG00000019564
ORF61	ENSMUSG00000013858
Cnn2	ENSMUSG00000004665
Polr2e	ENSMUSG00000004667
Gpx4	ENSMUSG00000075706
Sbno2	ENSMUSG00000035673
Stk11	ENSMUSG00000003068
Atp5d	ENSMUSG00000003072
Dos	ENSMUSG00000035640
Midn	ENSMUSG00000035621
Cirbp	ENSMUSG00000045193
1600002K03Rik	ENSMUSG00000035595
Efna2	ENSMUSG00000003070
Mum1	ENSMUSG00000020156
Ndufs7	ENSMUSG00000020153
Gamt	ENSMUSG00000020150
Dazap1	ENSMUSG00000069565
Rps15	ENSMUSG00000063457
Apc2	ENSMUSG00000020135
2310011J03Rik	ENSMUSG00000020133
Reep6	ENSMUSG00000035504
Mex3d	ENSMUSG00000048696
Mbd3	ENSMUSG00000035478
Uqcr11	ENSMUSG00000020163
Tcf3	ENSMUSG00000020167

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr10:79565195-79565210	GAGGGTCAGAGGTCG	+	6.66
SP1	MA0079.4	chr10:79565168-79565183	TGGGGGCGGGGTCAG	-	6.14

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_03196	chr10:79557914-79570455	TACs
mSE_06398	chr10:79563186-79566633	E14.5_Liver
mSE_07421	chr10:79560809-79566164	Intestine
mSE_08625	chr10:79560270-79566202	Liver

Enhancer Sequence

GTGGGGTCTC GCCTCACAGA GAGAGATGGG GCGCACAGGG GTCGTGACTG GGGGCGGGGT 60
CAGGGGGGTC GCGGGGAGGG TCAGAGGTCG CGCGCGGTGC GGCACCCTCC TCCGCGTCCG 120
CTCCCACCCT GCAGCCAAGG AACGGCCGCG AGAAGCCCGG AACCAGAGCC TGGCCGCACG 180
AGTCGCGTGG GGATCGCGAA AGGGTCACAG TGGCGTCTCG GGCCGGCGCC 230