EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM010-09057

Organism

Mus musculus

Tissue/cell

Brain_E14.5

Coordinate

chr3:89882800-89883440

Target genes

Number: 13
Name	Ensembl ID

Atp8b2	ENSMUSG00000060671
Hax1	ENSMUSG00000027944
4933434E20Rik	ENSMUSG00000027942
Ubap2l	ENSMUSG00000042520
1700094D03Rik	ENSMUSG00000078667
Tpm3	ENSMUSG00000027940
Nup210l	ENSMUSG00000027939
Rps27	ENSMUSG00000090733
Rab13	ENSMUSG00000027935
Jtb	ENSMUSG00000027937
Creb3l4	ENSMUSG00000027938
Slc39a1	ENSMUSG00000052310
Dennd4b	ENSMUSG00000042404

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Esrra	MA0592.2	chr3:89882901-89882912	ATGACCTTGAA	-	6.62
Esrrg	MA0643.1	chr3:89882901-89882911	ATGACCTTGA	-	6.02
Nr5a2	MA0505.1	chr3:89882900-89882915	GATGACCTTGAATTT	-	6.77
SP1	MA0079.4	chr3:89883373-89883388	CAAACCCCGCCCCCT	+	6.49
SP2	MA0516.2	chr3:89883372-89883389	CCAAACCCCGCCCCCTT	+	7.08
SP4	MA0685.1	chr3:89883373-89883390	CAAACCCCGCCCCCTTT	+	7.15

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_07586

chr3:89882713-89888321

Intestine

Enhancer Sequence

ACTTCCAGAT GGGAGAGAAC TGTCTCAACA GTTTTGGGGG TTGTTTTGAG ACAGCGTTTT 60
ATGTAGCTCA GACTAGCCTT AAATTCACCC TGTAGCCAAA GATGACCTTG AATTTCTGCT 120
CTTTCTGTCT CACCCACTAA GTACCGAATG GTACTTATGG ATACGTGCCA CTAGGCTAGT 180
TTAAGTGCTC CTGGAGATTC AGCCCAGGGC TTCGAATGTG CTTGGCTAGT GCTTTACAAA 240
CTGAGCAATA TCCACAGCTC CTCCTAATAG ATTTTCAAAG GACCTCACTG GGACTCCTTG 300
CAAGGTGAAG GCTAGAGTCT TCTGTCTAGG CTTGTCTCAG AACCTGGTTT TGGAATCTGT 360
CCTAGACTGA GTAGAAGTGG AAGCACATGG GATATTTTAA ATTGCGGAGC GGGAGCAGAC 420
GCAGTGGTAG GGAGGCACCG GATAAGAGAG GGGTCAACTG CGTAAGTGTT CACGACAGCA 480
CCATTTTAGT AAATGGGACA GCCATTGTTA CGAGACAGCC TGGTGGGTGA GGCTAGACTA 540
TGAAGCGCCT CTCAGTTACT ATGGTAGCCT TACCAAACCC CGCCCCCTTT ACTGGACTAA 600
GGAAAGACGG CCCTGAGTGG TCGCCTAGGG TTACTGGGAG 640