EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM010-00813

Organism

Mus musculus

Tissue/cell

Brain_E14.5

Coordinate

chr1:172968100-172968770

Target genes

Number: 18
Name	Ensembl ID

Dusp12	ENSMUSG00000026659
Fcgr2b	ENSMUSG00000026656
Fcgr3	ENSMUSG00000059498
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Pcp4l1	ENSMUSG00000038370
Tomm40l	ENSMUSG00000005674
Apoa2	ENSMUSG00000005681
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Pfdn2	ENSMUSG00000006412
Klhdc9	ENSMUSG00000045259
Tstd1	ENSMUSG00000091166

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

GATA2	MA0036.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata1	MA0035.3	chr1:172968578-172968589	AGAGATAAGAA	-	6.32
Gata4	MA0482.1	chr1:172968577-172968588	AAGAGATAAGA	-	6.02
SPIB	MA0081.2	chr1:172968566-172968578	GATGCGGAAGTA	+	6.14

Enhancer Sequence

TAGAAAGCAT AAAAAAAATT TTAACTTTGC GTTGGCCGGG AATCGAACCC GGGTCAACTG 60
CTTGGAAGGC AGCTATGCTC ACCACTATAC CACCAACGCA GCACGGCGAC CGCTTTCGTT 120
TCGTCTCTTT AATAGAAGGA AGAAATTTAC TGAGCATGTT TGTATCTGTT TTCCGCAAAT 180
TTAAAAATGG ATTCCGTGAG AAAATTCGGC GTCAACCCAG AAGGAAATAT TTCCTCCGCT 240
TCTCGCCCTG TTCACCGCCT GACGTTCTCG GTTCCAGGCT CCGCAAACGC TCAGCGCCTC 300
CAGGCAGCTC CCAAAGTCCA CCCGGCACCG GTTCCATAAG CGACTTAGAA CGACCGGTGG 360
GGAGGAGAAC TGGTCGCTAA GAGATCATCT GCGGCCTGAC TCGGCCCCTC TGATAAAAAG 420
AAAACCGAAA GGTCCCAGAA GAGATGGATG ATGGAAGGTT TAAAGAGATG CGGAAGTAAG 480
AGATAAGAAA GATCTGTCCG CTACTTTCAC TTGTTTTGCT TTGCAAAAAC GTTCCCGGAG 540
AGTTCGTGTT TCTTTTTATC TGGAGAAATC ACAGATGGCG GCGTCATCGC CATTTAAGGG 600
TATTAAAGCC CTTATAAAAA TGTATGAAAG CCACACTACC ATGTGTCAGG ATGGCCGAGC 660
GGTCTAAGGC 670