EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM010-00304

Organism

Mus musculus

Tissue/cell

Brain_E14.5

Coordinate

chr1:75381770-75382180

Target genes

Number: 12
Name	Ensembl ID

Glb1l	ENSMUSG00000026200
Tuba4a	ENSMUSG00000026202
Ptprn	ENSMUSG00000026204
Dnpep	ENSMUSG00000026209
Des	ENSMUSG00000026208
Speg	ENSMUSG00000026207
Chpf	ENSMUSG00000032997
Tmem198	ENSMUSG00000051703
Obsl1	ENSMUSG00000026211
Inha	ENSMUSG00000032968
Stk11ip	ENSMUSG00000026213
Slc4a3	ENSMUSG00000006576

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Ascl2	MA0816.1	chr1:75382113-75382123	AGCAGCTGCT	+	6.02
Ascl2	MA0816.1	chr1:75382113-75382123	AGCAGCTGCT	-	6.02
MAFF	MA0495.3	chr1:75382103-75382118	CTGCTGTCTCAGCAG	+	6.01
MAFF	MA0495.3	chr1:75382103-75382118	CTGCTGTCTCAGCAG	-	6.01
RREB1	MA0073.1	chr1:75381903-75381923	CCCCACACCACTCCCACCCA	+	7.18

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_03786

chr1:75380143-75382351

Cerebellum

Enhancer Sequence

TCTCATCTCA CCATGCTGTC CTGTGCGGCC CCATCACTGC TCCACCAACC TCCACCCCGG 60
TCTTCTCTGC CTCATCCATC TCTGTGCCTT CCATTACCCA CTGCTTCCAC GCCTAGCCTT 120
GGCTACACTC TCTCCCCACA CCACTCCCAC CCACGGCCTC CTGCTCCCAC CTGTGCTGGC 180
TCACAGTGCC GTCTTCGTGG TCTTGGGACC CCCTCTGTCC CTTCCACGGC TCCTCTAAGA 240
GCTCCAGTTT GCCAGGGCCC CTCTCCTGCC TCGCCTATGT AGGCTCCAGT TGTCCTAGGA 300
TCTCCCCCCC CCCCTCAGAG GCCCCCTCCG TGCCTGCTGT CTCAGCAGCT GCTGCCTTTT 360
CCTTTCCCTG CACATTCCTG TTCCCATGTG GGCCTTTTTC TGGGAGGAAC 410