EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM008-03309

Organism

Mus musculus

Tissue/cell

Bone_marrow

Coordinate

chr15:100249760-100250550

Target genes

Number: 15
Name	Ensembl ID

Atf1	ENSMUSG00000023027
Mettl7a1	ENSMUSG00000054619
Mettl7a3	ENSMUSG00000058057
RP24	ENSMUSG00000093789
Mettl7a2	ENSMUSG00000056487
Higd1c	ENSMUSG00000093550
Gm5475	ENSMUSG00000087444
Slc11a2	ENSMUSG00000023030
n	ENSMUSG00000084688
Letmd1	ENSMUSG00000037353
Csrnp2	ENSMUSG00000044636
Tfcp2	ENSMUSG00000009733
Pou6f1	ENSMUSG00000009739
C330013E15Rik	ENSMUSG00000090611
Dazap2	ENSMUSG00000000346

TF binding sites/motifs

Number: 10

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr15:100250261-100250273	AAACAAACAAAC	-	6.32
ZNF263	MA0528.1	chr15:100250451-100250472	AGGGAAGGAGAGGAGGGAGGG	+	6.01
ZNF263	MA0528.1	chr15:100250470-100250491	GGGAGAGGAGGGGAGGGGAAA	+	6.09
ZNF263	MA0528.1	chr15:100250473-100250494	AGAGGAGGGGAGGGGAAAAAG	+	6.31
ZNF263	MA0528.1	chr15:100250023-100250044	TCCTCCTCCCTGTCCTCCTTG	-	6.48
ZNF263	MA0528.1	chr15:100250463-100250484	GAGGGAGGGGAGAGGAGGGGA	+	6.88
ZNF263	MA0528.1	chr15:100250450-100250471	GAGGGAAGGAGAGGAGGGAGG	+	7.04
ZNF263	MA0528.1	chr15:100250454-100250475	GAAGGAGAGGAGGGAGGGGAG	+	7.17
ZNF263	MA0528.1	chr15:100250459-100250480	AGAGGAGGGAGGGGAGAGGAG	+	7.64
ZNF263	MA0528.1	chr15:100250020-100250041	CTCTCCTCCTCCCTGTCCTCC	-	7

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06305	chr15:100249397-100253442	E14.5_Liver
mSE_11779	chr15:100249659-100251283	Placenta

Enhancer Sequence

GCCTCAGGGC TTCCTGATGA AGCTGAGTGG TAGAGTGCAC GTCCTGGTGT TGATTGTCAG 60
CATCCAGTTG ACCGCGGCAT CACAGGTCTG TTTACCCCAG CACTTGGTGT GTGAGTGTCT 120
ACCTGCCTGG GTTACTATGA TGCCTTTATT CCACACAGCA CGCAAGCTCG TAAAGCACAA 180
ACGGTGCTCC TGTTATACAA GGCCACTATG CCTGAATCAG GGCCAGCCCT CTCTGACACA 240
GAGGCTGACA TTTCGCTAGC CTCTCCTCCT CCCTGTCCTC CTTGAGAACT GCAATTTCAA 300
CTCAATACCC AGTGCACTGC TTTGAACCTC GGTTTGATTT TCAGTTCTGA GAATGAAAGA 360
ACAGCTAACA GGGTGGGGAT GGGGCAGCCT TTAATCTTAG CACTAGTGGG AGGCAAAGGC 420
AGACTCTGTG AGTTGCAGGC CAGTGTGGAG CCACATGGTG AGCTATAGCC AGGACTACAT 480
ACAAAATAAA GACTCTGCCT CAAACAAACA AACATTAAAG AAGCAAGAAA AGGAAAACCC 540
AGCATGGTGA CTGAGTCATG GAACTCTGGC CTTTAGGAGA CTAAAGCAGG GAGCTAAGAG 600
TTCCCGGCCA GTGTGGGAGA AGCTGCAGGC CAGTCTAAGC TAGCTAGCCA GATCCTGTCT 660
GCAGACACAC AGCCACACAC AGAAAAAAGG GAGGGAAGGA GAGGAGGGAG GGGAGAGGAG 720
GGGAGGGGAA AAAGACCTGG GGAGAGGAAT ACAGTTGATA ATGAAACTGC CTGCTCGGGT 780
GTCAGTGAAG 790