EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM008-00406

Organism

Mus musculus

Tissue/cell

Bone_marrow

Coordinate

chr1:132638020-132638580

Target genes

Number: 7
Name	Ensembl ID

Zp3r	ENSMUSG00000042554
C4bp	ENSMUSG00000026405
Yod1	ENSMUSG00000046404
Pfkfb2	ENSMUSG00000026409
Fcamr	ENSMUSG00000026415
Pigr	ENSMUSG00000026417
Faim3	ENSMUSG00000042474

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr1:132638079-132638090	GGGAGATAAGA	-	6.62
NFE2L1	MA0089.2	chr1:132638027-132638042	CAATGAGTCAGCATA	+	6.2
Nfe2l2	MA0150.2	chr1:132638025-132638040	GACAATGAGTCAGCA	+	6.47

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06245	chr1:132635957-132643272	E14.5_Liver
mSE_07795	chr1:132635681-132638223	Intestine

Enhancer Sequence

CAGGAGACAA TGAGTCAGCA TAGGGGAGCT AATCTGGGCG AGCCAGAGAA CAAGACTGTG 60
GGAGATAAGA GAGGGGTGCT CCAGCGGTAT GTGGTACCTT GAGGCCCCTG TAAAGAGACA 120
GCAGAAAGCC TGTGGAGTCC CAACTCAGTA AAAGAGCATG GGGTGGCACC CAACTGTGCG 180
AGAATGTGTT CCAGGGTAAA CAGAAAACAC TGCTACTCTG GATGTCACAC TGCTATTGTT 240
TGCTAATTCA GTAAGTACTT TTTAACATGG CCTTGGGCTA CCCCCCACCA TCTAGACAGA 300
GTAGAAATGG AAACTTCATT GTGCCCCAAA GCTAATTCAC TGGGCCCAGC AGGCCTCACA 360
TACCTGCCAA GATCACTAGG GCAAGATACC GTGTCAGTCA CTGTTATGGT CACTAGCTAT 420
CACAGAAACA CCAAGCTCTC CTAGGAATTG ACAGCAGAAG GCCAAAGCAC ATCAAGTTTA 480
GATCAGGCAC TTCCATGGCT CTGTGACCTG GGAGACATGA TAGCTACAAA GAACGTAAAG 540
ATCTTAAAGT CTCTCCATGA 560