EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM007-10583

Organism

Mus musculus

Tissue/cell

BAT

Coordinate

chr19:5852740-5854060

Target genes

Number: 20
Name	Ensembl ID

SNORD86	ENSMUSG00000088909
Rnaseh2c	ENSMUSG00000024925
Rela	ENSMUSG00000024927
Pcnxl3	ENSMUSG00000054874
Map3k11	ENSMUSG00000004054
Kcnk7	ENSMUSG00000024936
Ehbp1l1	ENSMUSG00000024937
Fam89b	ENSMUSG00000024939
Scyl1	ENSMUSG00000024941
Gm20417	ENSMUSG00000092267
Malat1	ENSMUSG00000092341
Neat1	ENSMUSG00000092274
Gm9783	ENSMUSG00000043488
Frmd8	ENSMUSG00000024816
Slc25a45	ENSMUSG00000024818
Tigd3	ENSMUSG00000044390
Cdc42ep2	ENSMUSG00000045664
Slc22a20	ENSMUSG00000037451
Mrpl49	ENSMUSG00000007338
1110014N23Rik	ENSMUSG00000024797

TF binding sites/motifs

Number: 15

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NKX2-5	MA0063.2	chr19:5853461-5853471	CTCAAGTGGT	-	6.02
Nr5a2	MA0505.1	chr19:5853975-5853990	GAGTTCAAGGCCAGC	+	8.25
ZNF263	MA0528.1	chr19:5853560-5853581	GGAGGAGGAGGAGGAGGAGAG	+	10.75
ZNF263	MA0528.1	chr19:5853533-5853554	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853536-5853557	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853539-5853560	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853542-5853563	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853545-5853566	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853548-5853569	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853551-5853572	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853554-5853575	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853557-5853578	GGAGGAGGAGGAGGAGGAGGA	+	12.34
ZNF263	MA0528.1	chr19:5853566-5853587	GGAGGAGGAGGAGAGAAAGAC	+	6.75
ZNF263	MA0528.1	chr19:5853563-5853584	GGAGGAGGAGGAGGAGAGAAA	+	8.91
ZNF263	MA0528.1	chr19:5853530-5853551	AAAGGAGGAGGAGGAGGAGGA	+	9.45

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_04792	chr19:5851316-5853053	E14.5_Heart
mSE_07139	chr19:5850940-5852913	Intestine
mSE_10074	chr19:5850907-5852979	Embryonic_stem_cells
mSE_12595	chr19:5850943-5853115	Testis

Enhancer Sequence

GCCTGTGAGG GTGACAGAGA GGCTGAGAAG AGGCACTGGG TAGGTGGCCC ACACCCCAGG 60
AGGCTGGGCT CCACTCTTAC TGGGTCAGTT TCTCCTGGAG TCGCTTAAAC TGTGCTTCCC 120
CATCAGAACT GTCATCACTG AGCCTGTCCC TGGGCTGTAT CATCAGTGGC AGGAGGGCCC 180
CATGGTCACC TCCACCATCC CATCAGAAGC TCCAGAAGAC TCCAGACTGA CTGCTGGGTG 240
ACGACCACTA AGACAGGGAT AGCTGAGGAT GGGAAGCCAA ATAAAAGATG GAGGGCATGT 300
GTGGCTATAG TCGGGGCACA ATTACGGCAG TGAGGAGCCA CCCTGTTCTG CCGGTTCACA 360
TCCCCAAACT CATCAACTCT CGAGGAAAAC CAGCCAATTC TAGCAACAGG CCTTTTACAA 420
AATACTCAGG CCAAACCAAG GCCCGACAGC TACACAGCGT GTGGCCAGGA GTCTCTGAGG 480
CGAGAGGACA ATGCCATGCT CCAGGTCAGC CTGGGCCACA GTGCACACTG GGTAAGGTAC 540
TACAATAAAA AAGAAGTGAA TACTGGGGCT GGAGTGATGG CTCAGCCATT CAGAGCTCTG 600
GCTGCTCTTC CAGAGGTCCG AGTTCAGTTC CTAGCACTGG TAGGGCGGCT CACAACCCTC 660
TGTAACTCCA GCTCCAAGCT CCAGTCCCAG CTCCCTCGTC GGCCTCCTTA GTCACTAGAA 720
ACTCAAGTGG TACAGACCCA CAGGAAGGCA AACACGTATA GACTGTAACT AAGTTTAAAT 780
ATTAAACCTA AAAGGAGGAG GAGGAGGAGG AGGAGGAGGA GGAGGAGGAG GAGGAGGAGA 840
GAAAGACAAG GAAGGAAGAA TCACAATGCT GCCCAAGAGG AAGAGGAGGG ACAATTTCAT 900
GTCCTCTGGG CCAGGCATGG TGGTGCATGG TGGTGCACAC CTTTGTCCCA GCAGAGTAGC 960
AGAGGCAGGC AGTTCTCTAA AAGTTCGAGG CCAGCCTGGT CACCATGCCC GGCAAAACAA 1020
AAAAATTTTA ATAAATAGTC TACATAGGCT AGCTAGCATA GAACTCACTA TTTAGCCCAA 1080
GGTGGCTTTG GACTTCTGAT CTTGCCTTTA CCTCCCAAGT ACAAAGCTAA CAGCTGTATT 1140
TATCATAGCT GGCTTTGAAA ATAACATCTC ACCCGGGTGG TGGTGGCGCA CGCCTTTAAT 1200
CCCAGCATTT AGGAAGCAGA GGCAGGCGGA TTTCTGAGTT CAAGGCCAGC CTAGTCTACA 1260
GAGTGAGTTC CAGGGCAGCC AGGACCATAC AGAGAAACCC TGTCTTTTTT TTTTTTTTTT 1320