EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM007-01759

Organism

Mus musculus

Tissue/cell

BAT

Coordinate

chr10:79786690-79787670

Target genes

Number: 23
Name	Ensembl ID

Cfd	ENSMUSG00000061780
Polr2e	ENSMUSG00000004667
Gpx4	ENSMUSG00000075706
Stk11	ENSMUSG00000003068
Atp5d	ENSMUSG00000003072
Cirbp	ENSMUSG00000045193
1600002K03Rik	ENSMUSG00000035595
Mum1	ENSMUSG00000020156
Ndufs7	ENSMUSG00000020153
Gamt	ENSMUSG00000020150
Dazap1	ENSMUSG00000069565
Gm15122	ENSMUSG00000087672
Rps15	ENSMUSG00000063457
Apc2	ENSMUSG00000020135
2310011J03Rik	ENSMUSG00000020133
Reep6	ENSMUSG00000035504
Adamtsl5	ENSMUSG00000043822
Plk5	ENSMUSG00000035486
Gm15123	ENSMUSG00000087432
Gm15124	ENSMUSG00000085712
Mex3d	ENSMUSG00000048696
Mbd3	ENSMUSG00000035478
Uqcr11	ENSMUSG00000020163

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr2f6(var.2)	MA0728.1	chr10:79787035-79787050	AAGGTCCAGAGTTCA	+	6.32
RREB1	MA0073.1	chr10:79787340-79787360	ACGGGGGGGGGGGGTGGGGG	-	6.11
RREB1	MA0073.1	chr10:79787342-79787362	GGGGGGGGGGGGTGGGGGGG	-	6.17
RREB1	MA0073.1	chr10:79787344-79787364	GGGGGGGGGGTGGGGGGGGC	-	6.57
RREB1	MA0073.1	chr10:79787341-79787361	CGGGGGGGGGGGGTGGGGGG	-	6.58
ZNF740	MA0753.2	chr10:79787344-79787357	GGGGGGGGGGTGG	-	6.44
ZNF740	MA0753.2	chr10:79787353-79787366	GTGGGGGGGGCAG	-	7.34

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06354	chr10:79785034-79787114	E14.5_Liver
mSE_07738	chr10:79785976-79787143	Intestine

Enhancer Sequence

CGTGGTGACC TGGGACAGAC AGCAGAGGGA CCTTGAGCTC AGTGCGCAGC CCAGATGGAG 60
AAATTGTATA GAAGGTACTA GGGACTAAGT TTTCAGAGTG AACATCAGAC TAAGTGAACA 120
TTCAGAAAAG CTGAAGAAAC ACATGGAGGA CTGAGTCCAA AAGGTACTGA AAGGGCCTGG 180
TGATACAGGC ATTTAATTCC AGGACTCACT GGGGCAGAGG TTGGAGAAGC TGTGACCTCT 240
AGCCTAGATT GGTCTACACT GTGAGTGTCT GGCTCAAATA AAGAATACTA ATGACCGGGG 300
CTGGTGAGAT GGCTCAGTGG GTAAGAGCAC CCGACTGCTC TTCCGAAGGT CCAGAGTTCA 360
AATCCCAGCA ACCACATGGT GGCTCACAAC CATCTGTAAT GAGATCTGAC TCCCTCTTCT 420
GGAATGTCTG AAGACAGCTA CAGTGTACTT ACATATAATA AATAAATAAA TCTTTAAAAA 480
AAAAAAAAAA GAATACTAAT GACCAAGTTT AGCAAGTACT GAGGACTAAG TTCATCAGTT 540
ACTAAGGGTC TGCTAAGGAC TAAGCTCCAA AACCACTGAG CACTGAGTTC AAAATGTTAC 600
ATAGCCCTAC ATCTAAAACG TGCCAAGCCT CAAAGGTTGG TGAAGTAGGG ACGGGGGGGG 660
GGGGTGGGGG GGGCAGAGGC CACACAGTCA ATGGCCCAAT GATGGGGAAC CTCAGAGTCA 720
GCCCGTACAA AGGGAATGTT CTTCAGAGAG CCTCCATGTG GCAGGGGCAC AAATAGACCA 780
GGCACTGGCA CAGATCTTGC CCGAGGGGGG TGGCCGGGCA GAAGGGGCAG GGCCTGTGTG 840
GCCAGGTCTT GTGGAGTGGG ACTTGCTTGG GGACTGGGAT CTGGAGGGAT GTGGCCACTG 900
CCTGGGGGTG AAGCCTGGGG TGGTGGGGTC TAGGTGAAGA CCCCCTGCAG GCGGGGCCTG 960
TGGTGTGGGC TTGGCTGTAT 980