EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-10028

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr8:73197350-73197720

Target genes

Number: 27
Name	Ensembl ID

Ddx49	ENSMUSG00000057788
Cope	ENSMUSG00000055681
Gdf1	ENSMUSG00000055694
Upf1	ENSMUSG00000058301
Comp	ENSMUSG00000031849
Crlf1	ENSMUSG00000007888
2810428I15Rik	ENSMUSG00000058833
Uba52	ENSMUSG00000090137
Fkbp8	ENSMUSG00000019428
2810422J05Rik	ENSMUSG00000055553
Ell	ENSMUSG00000070002
Isyna1	ENSMUSG00000019139
Ssbp4	ENSMUSG00000070003
Lrrc25	ENSMUSG00000049988
Pgpep1	ENSMUSG00000056204
Gm11175	ENSMUSG00000080058
Pde4c	ENSMUSG00000031842
Rab3a	ENSMUSG00000031840
Mpv17l2	ENSMUSG00000035559
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Mast3	ENSMUSG00000031833
Il12rb1	ENSMUSG00000000791
Arrdc2	ENSMUSG00000002910
Kcnn1	ENSMUSG00000002908
Ccdc124	ENSMUSG00000007721
Snora68	ENSMUSG00000077563

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

STAT1	MA0137.3	chr8:73197563-73197574	TTTCCGGGAAA	+	6.32
Stat4	MA0518.1	chr8:73197563-73197577	TTTCCGGGAAATGG	+	7.82

dbSUPER

Number of super-enhancer constituents: 4
ID	Coordinate	Tissue/cell

mSE_01569	chr8:73196702-73224932	Th_Cells
mSE_07175	chr8:73196232-73199738	Intestine
mSE_10177	chr8:73194824-73200563	Embryonic_stem_cells
mSE_12525	chr8:73196512-73199999	Spleen

Enhancer Sequence

AAGATGGTGA GGGCCGCGAG GCGGAGGGGC GCGCGCAGGG TCTTCGGGCT GCTGAGAGAT 60
GGGGGAAACT GAGGCCGGAG TGACCGGTGT CCCTCCAGGG CCCCAGACGG TCACCGTTGG 120
GGATTTATCT CTTGATGGAC ACGGTTTTTG CGACCGGAAG AGGGACTATG ATCGTTTCCG 180
GGGCTTGTCA CCGTCATTGA TAGGAAAGCT GCGTTTCCGG GAAATGGGCG GGCTTAATGG 240
CTCACGTGGG CTTCGTTGCC CTCTTGATGC TTATCTGGTG TCTGACCTCA GCTGCCCACG 300
CCTTTGGCTG GAAATCCAGC TCAGAGAGCG GGTTGATTCT CTCCCTGGGA CACACAGCAT 360
GTCTTGCTCA 370