EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-07579

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr4:144866500-144866790

Target genes

Number: 11
Name	Ensembl ID

Vps13d	ENSMUSG00000020220
Tnfrsf1b	ENSMUSG00000028599
Tnfrsf8	ENSMUSG00000028602
Gm13024	ENSMUSG00000082758
Gm13224	ENSMUSG00000084272
Gm13227	ENSMUSG00000085101
Gm13223	ENSMUSG00000083081
Smarca5	ENSMUSG00000052912
Gm13228	ENSMUSG00000082352
Gm13212	ENSMUSG00000078502
Gm13231	ENSMUSG00000081885

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Nr5a2	MA0505.1	chr4:144866744-144866759	GATTTCAAGGTCAGC	+	7.31
SPI1	MA0080.4	chr4:144866623-144866637	CACTTCCTCTTTTA	-	6.65

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_01454	chr4:144799207-144890681	Th_Cells
mSE_02266	chr4:144830564-144877140	Macrophage

Enhancer Sequence

GCATGTGCTC CTACCCCTGA TCTCCAAGGA GGCAGCTAGG GGCACAGGGC CCAGCACCAG 60
CTCTGAACTC CCACAATGCA GATTCTAATG GAGCCACCAA CTGCTCCTGA CTTGTCGGAT 120
TGCCACTTCC TCTTTTACCA AAAATGTGGC AAGAGTAACC ATTCCTGAGA GTCAGAAGGA 180
CTCTGGGGCA ATGTCTAGCA CAAAGAAAGG GGGTCTAGCA AGCCGGAAGC AGTGCTCACA 240
CTTGGATTTC AAGGTCAGCG ATGGCTGCAC AGTCAAAGAA GAGACAGCTG 290