EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-07511

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr4:135733400-135734260

Target genes

Number: 22
Name	Ensembl ID

Srsf10	ENSMUSG00000028676
Cnr2	ENSMUSG00000062585
Fuca1	ENSMUSG00000028673
Hmgcl	ENSMUSG00000028672
Lypla2	ENSMUSG00000028670
1110049F12Rik	ENSMUSG00000028669
Gm13008	ENSMUSG00000085714
Tceb3	ENSMUSG00000028668
Rpl11	ENSMUSG00000059291
Gm13009	ENSMUSG00000082877
Id3	ENSMUSG00000007872
E2f2	ENSMUSG00000018983
Asap3	ENSMUSG00000036995
Tcea3	ENSMUSG00000001604
Zfp46	ENSMUSG00000051351
Hnrnpr	ENSMUSG00000066037
2610528B01Rik	ENSMUSG00000086084
9130020K20Rik	ENSMUSG00000086568
Gm17388	ENSMUSG00000091448
Htr1d	ENSMUSG00000070687
6030445D17Rik	ENSMUSG00000066178
Luzp1	ENSMUSG00000001089

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr4:135733704-135733724	GTGGTGGTGGTGGGTGGGTG	-	6.17
RREB1	MA0073.1	chr4:135733712-135733732	GGTGGGTGGGTGGTGTCTGG	-	6.25
RREB1	MA0073.1	chr4:135733701-135733721	GTGGTGGTGGTGGTGGGTGG	-	6.5
RREB1	MA0073.1	chr4:135733708-135733728	TGGTGGTGGGTGGGTGGTGT	-	7.51
TCF3	MA0522.2	chr4:135733772-135733782	AGCAGGTGTT	-	6.02

dbSUPER

Number of super-enhancer constituents: 7
ID	Coordinate	Tissue/cell

mSE_00975	chr4:135720901-135734258	Myotubes
mSE_02979	chr4:135723245-135737905	TACs
mSE_03331	chr4:135727806-135735305	Bone_Marrow
mSE_06048	chr4:135726971-135737917	E14.5_Liver
mSE_07633	chr4:135732928-135734758	Intestine
mSE_12085	chr4:135727783-135737975	Spleen
mSE_13001	chr4:135728269-135736744	Thymus

Enhancer Sequence

TTTCCTGAGC CCCTACTGTG TGTCTCCTAC TGAGAACATC CCTAGAGTCT TTGCCACAGT 60
CCTCCAGGTC ATGATCTTCT GCCCATTTTA CTGAGCAGGA AACTGAGGCC CTTAGCGACG 120
GTTGGCACAT GTCCCTAGGT CACACAGTGA GACTTCAGAC TTGCTGGAGA TTCCAGCTGG 180
CCCTTTGCCC AGTGTCCCAG TGCCCCAGTG TTTCTGCCCC ACCCCTGCCC AGCCCTAAGC 240
CATCAGGGAG GCCCTTTCCG GGCAATGCAG CTAGAAGCCT CATTGTGGCC CTGTGGTGGT 300
GGTGGTGGTG GTGGTGGGTG GGTGGTGTCT GGGTAGAGCA GCCGAGCAGA TGGGCTGTGG 360
TTTGGTTTCC CCAGCAGGTG TTTCCCAAGC TTGGCGGGAA CGGGGAGGGG CAGCAGGGCC 420
TCAGCTGCTT GTCCTTAAGA CACTGGGGAA GGACTCATTG TGTCTCAGTA AAGAAAGAAT 480
GACAAGCAGT CCATTCTGGA GGCCCTGGAA CCTCAAGCTG GAGCCCAAAC CGGGATGGGG 540
GTGGGCAGGA GGGAGAGTGT TTGCACTGTT TCCCAATGCG GGCACCTCCC TGGGGTGTGG 600
CACTGAGCCA GGAAGTCCCC TGGGCCTGGG CGGATGCTGG CCCCACCCTG ATAAGGGCCA 660
GCTGTGGAGC TGTGATGGGC ACCAGGTTGG AATGAACCAG CTGCTTCTGA AAGGGACAGG 720
TCCCCAGCCT GATTATTTGC CTCTCACTTC AGTGGGCGCT GACACTTCCT CACCAAGTTC 780
AGCCGGCCAC GCCACACACC GCACTGAGGG CTGGTGGCAA GCACACAGGA GATGGCTGGC 840
TGTTGCTGGC CTTGCTGCAG 860