EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-07397

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr4:129373440-129373950

Target genes

Number: 9
Name	Ensembl ID

Eif3i	ENSMUSG00000028798
2510006D16Rik	ENSMUSG00000028797
Dcdc2b	ENSMUSG00000078552
Gm12965	ENSMUSG00000086797
Ccdc28b	ENSMUSG00000028795
Khdrbs1	ENSMUSG00000028790
Ptp4a2	ENSMUSG00000028788
Gm10571	ENSMUSG00000073753
Gm12966	ENSMUSG00000070729

TF binding sites/motifs

Number: 6

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP1	MA0079.4	chr4:129373505-129373520	AAGACCCCGCCCACA	+	6.1
SP1	MA0079.4	chr4:129373474-129373489	GAAACCCCGCCCACA	+	6.29
SP4	MA0685.1	chr4:129373474-129373491	GAAACCCCGCCCACACA	+	6.06
ZBTB7B	MA0694.1	chr4:129373923-129373935	GCGACCCCCGAA	+	6.62
ZNF263	MA0528.1	chr4:129373850-129373871	CCCTCCCCCTCCCCCTGCCCG	-	6.01
ZNF263	MA0528.1	chr4:129373844-129373865	CCCTTCCCCTCCCCCTCCCCC	-	8.42

Enhancer Sequence

AGAAGCTCGG CACCCACATA AAGCCCCTAG CCCAGAAACC CCGCCCACAC ACAACTGTCA 60
ACCCCAAGAC CCCGCCCACA AGCCGGGCAA TGCTCTCTAG GACTGGAAGC TTGAATCGGA 120
ATGGACTCCC TTGGTGGGCT AGGTGTCCCT GCGGCCCCAC CGCTCTCAGT GTAAACCCCT 180
ATAGTCCAGA AAATTCTCTC CCCCACCGGC AATCACAAAA GGCGAACCCT AAGCTCTCAG 240
CCCCTCCCAC CAGAGTGCCC GGCCCCCATC TGCAGACAGG AGAATTGTGT GCCCCAAAGA 300
AAGCCTGAGC CCCTCCGAGC CCCTCTCCCT TTTGGAAGCT CCGCCTACCA AGCGGTGACC 360
CGCCCCCTCA GGACCGGAGG GGCGGGGTCC CGCCTGCGCC GCGTCCCTTC CCCTCCCCCT 420
CCCCCTGCCC GCGACTCCGG TCCGCGTGGG GAGGCAGTTC GCAGCCAGGC TCCCCGCTAT 480
CCCGCGACCC CCGAACGAGC CCAGCCAGCT 510