EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-05579

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr19:53874990-53875370

Target genes

Number: 4
Name	Ensembl ID

Rbm20	ENSMUSG00000043639
Gm16298	ENSMUSG00000089807
Gm16299	ENSMUSG00000089679
Pdcd4	ENSMUSG00000024975

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EGR1	MA0162.3	chr19:53875009-53875023	TGTGCGTGGGCGTG	-	7.14
EGR2	MA0472.2	chr19:53875011-53875022	TGCGTGGGCGT	-	6.62
EGR3	MA0732.1	chr19:53875009-53875024	TGTGCGTGGGCGTGG	-	7.64
EGR4	MA0733.1	chr19:53875008-53875024	TTGTGCGTGGGCGTGG	-	6.9

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_05105	chr19:53873998-53878107	E14.5_Heart
mSE_06730	chr19:53874078-53877628	Heart

Enhancer Sequence

GGTTCCTCTG GAGACTGATT GTGCGTGGGC GTGGGCGTGG GCGTGTGTGT GTGTGTGTGT 60
GAATGTATGT GCATGCGTGT GCATGTGTGT GTTGCAGCAG TGGGCGACTC CTATTAACCT 120
ACCAAGTGAA AAGCCCAGAA CAAAAGAGAG AACGCAGGAT TATCATCGAT GCTATGAATC 180
ATCTCGGAGA GCTGTCATGG TGATATGAAT CACCCTATGG TAATGTTGTG GCAAAGGCCC 240
AAACACGGGT TAGCAGCAGT GACCCGGTAA TCTTGAAATT AGTCACAGAG GCCTAGCCAA 300
TGATGATCCA GCAACACCAT TGTTTGTGAA GAGAGTGTGC AACAGCCCTC CCTGTCTCCA 360
AGAAGGAAGA GACCCCCCCT 380