EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-00641

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr1:193048200-193048950

Target genes

Number: 10
Name	Ensembl ID

Rps6kc1	ENSMUSG00000089872
Angel2	ENSMUSG00000026634
Mfsd7b	ENSMUSG00000066595
Tatdn3	ENSMUSG00000026632
Nsl1	ENSMUSG00000062510
Batf3	ENSMUSG00000026630
Atf3	ENSMUSG00000026628
Nenf	ENSMUSG00000037499
Tmem206	ENSMUSG00000026627
Ints7	ENSMUSG00000037461

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF5	MA0599.1	chr1:193048308-193048318	GGGGCGGGGC	-	6.02
NFKB1	MA0105.4	chr1:193048490-193048503	TGGGGGTTCCCCT	-	6.05
SP2	MA0516.2	chr1:193048305-193048322	GAAGGGGCGGGGCTGAT	-	6.69

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_02857	chr1:193040236-193049657	HFSCs
mSE_03191	chr1:193016551-193049869	TACs
mSE_11724	chr1:193047398-193049679	Placenta

Enhancer Sequence

GTGACCGAAC GGGTGCAGTG CGAGCTACGG CCCCTTTAAG ACAGCGAAAC TCGAACTTTC 60
TATCCCGGCT TCTCGGCAGC GCGCTTACGT CACAGCGTTC TCCGTGAAGG GGCGGGGCTG 120
ATGACTCACG CAGTCGGGCC TCCGCCCTTC CGGGCCGCGC GCACGTGAGC GCGCCGCTCC 180
GCCTGTCTAA TTTTAGCTCT GAGGTGTCAG GGTCGTGCGA GGTGAGGCGG CGGGGTCGCA 240
ACGGGCTCGG GTGGGGTCCT CACGTGACTC CGTGAGGCGG CATGCTCAGG TGGGGGTTCC 300
CCTCAGGACT GGGGGGCCGG AGTCACGTGA GGTGAGGCGG GTCGTGATGG GTTTGGGTAA 360
GGGTCCCCTC GCGACGAGGA TGGGGTTGCA TGAGGTGAGG CGGCAAGCCC TGGTCCTCTT 420
GGTGAGCGGG GTCTTCAGGT CACGTGAAGT GACTGCACAA GGTCTCCACA GCTCGGACAC 480
GGGACCCCTC AGGAGTGGGT CGCCAGGTTC ATCTGAGGTG AGGCGTTGTG TGGGGTGTCC 540
TCTCCGGGTC ACGTAGGTGC ACCCGTGGGG TCAGTCGGCA GAGCCCGGGG CAGCTGAGCC 600
CGACTGTGTG GACAGCCCTT GCACTGCAGG TCCAGAGCGA TGTCAGTCAG AGAGGTGTGG 660
CATCTGGGTC TGTGGGCCAC ACCTCTTTCA ACCGAAGCAA GTTCTAGAAA GTCCCCTGGT 720
GGGTGAAACT TATCAGAGTT CAAGTTTAGG 750