EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM003-00360

Organism

Mus musculus

Tissue/cell

416B

Coordinate

chr1:132637760-132638180

Target genes

Number: 13
Name	Ensembl ID

Gm15675	ENSMUSG00000086825
Zp3r	ENSMUSG00000042554
C4bp	ENSMUSG00000026405
Yod1	ENSMUSG00000046404
Pfkfb2	ENSMUSG00000026409
AA986860	ENSMUSG00000042510
Gm15848	ENSMUSG00000086706
Pigr	ENSMUSG00000026417
Faim3	ENSMUSG00000042474
Il19	ENSMUSG00000016524
Il10	ENSMUSG00000016529
7SK	ENSMUSG00000089256
Eif2d	ENSMUSG00000026427

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gata4	MA0482.1	chr1:132638079-132638090	GGGAGATAAGA	-	6.62
NFE2L1	MA0089.2	chr1:132638027-132638042	CAATGAGTCAGCATA	+	6.2
Nfe2l2	MA0150.2	chr1:132638025-132638040	GACAATGAGTCAGCA	+	6.47
RUNX1	MA0002.2	chr1:132637883-132637894	TTCTGTGGTTT	+	6.32

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_06245	chr1:132635957-132643272	E14.5_Liver
mSE_07795	chr1:132635681-132638223	Intestine

Enhancer Sequence

GTAAGAGTCT GTCAGGGAAG CAGCACTCGG AAGACCAGAG TCTCCTAAAC ATTTCCCAGG 60
CAGAAAAGGG AGCCCTGTGC TCTCCTAGCC AGACTCAAGA AGAGGCTTCC TGAGAAGCCA 120
GCGTTCTGTG GTTTTATACC AAGTAACAGA GACCTCGGAA GGAAAGGAGT TTGCCTGGCT 180
CCCTTCCGGT CAGGGAAGAA CTTAAAAAGT GATAGGCTAC CTCATGTACT GAGGAGTCAG 240
GGAGGCCTAA GCAGTTGGCC CAGGAGACAA TGAGTCAGCA TAGGGGAGCT AATCTGGGCG 300
AGCCAGAGAA CAAGACTGTG GGAGATAAGA GAGGGGTGCT CCAGCGGTAT GTGGTACCTT 360
GAGGCCCCTG TAAAGAGACA GCAGAAAGCC TGTGGAGTCC CAACTCAGTA AAAGAGCATG 420