EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-37026

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr8:73361440-73362590

Target genes

Number: 27
Name	Ensembl ID

Cope	ENSMUSG00000055681
Lass1	ENSMUSG00000087408
Upf1	ENSMUSG00000058301
Klhl26	ENSMUSG00000055707
Crlf1	ENSMUSG00000007888
2810428I15Rik	ENSMUSG00000058833
Uba52	ENSMUSG00000090137
Fkbp8	ENSMUSG00000019428
2810422J05Rik	ENSMUSG00000055553
Isyna1	ENSMUSG00000019139
Ssbp4	ENSMUSG00000070003
Gdf15	ENSMUSG00000038508
Pgpep1	ENSMUSG00000056204
Lsm4	ENSMUSG00000031848
Jund	ENSMUSG00000071076
Gm11175	ENSMUSG00000080058
Rab3a	ENSMUSG00000031840
Mpv17l2	ENSMUSG00000035559
Ifi30	ENSMUSG00000031838
Pik3r2	ENSMUSG00000031834
Il12rb1	ENSMUSG00000000791
Arrdc2	ENSMUSG00000002910
A230052G05Rik	ENSMUSG00000020887
Slc5a5	ENSMUSG00000000792
Snora68	ENSMUSG00000077563
Mtap1s	ENSMUSG00000019261
Gm10654	ENSMUSG00000074252

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr8:73361605-73361617	GTTTGTTTGTTT	+	6.32
Nr5a2	MA0505.1	chr8:73361860-73361875	AAGTTCAAGGCCATC	+	7.55
Nr5a2	MA0505.1	chr8:73361687-73361702	GCTGGCCTTGAACTC	-	8.25

dbSUPER

Number of super-enhancer constituents: 3
ID	Coordinate	Tissue/cell

mSE_01561	chr8:73314859-73371125	Th_Cells
mSE_03487	chr8:73362400-73364426	Bone_Marrow
mSE_06101	chr8:73362081-73369558	E14.5_Liver

Enhancer Sequence

GGTTCCTAGG GAGACACCAA GTGCATTTTG AGCACTGGGC ACACCAAGGG TCATTTTGAG 60
CACTGGGCAC TTGGAGACCT GAGTCTTATA GAAAGACTGA GACAAGCGGG CTGTTTTAAG 120
TTTTGACCAG ATACCCCCAA ATAACATAAC CCTGTCTCTT TTTATGTTTG TTTGTTTGCT 180
TGTTTGTTTT CGAGACAGGG TTTCTCTGTG TAGCCCTGGC TGTCTTAGAA CTCACTTTGT 240
AGACCAGGCT GGCCTTGAAC TCAGAAATCC ACCTGCCTCT GCCTTAAAGG CGTGCATCAC 300
CACTGCCTGG CCAACCCTAT CTTAGGAAGC CAAAAGTTGA ATAAAAATTA AAAATAAGCC 360
AGGCGTGGTG GCGCACGCCT TTAATCCCAG CACTTGGGAG GCAGAGGCAG GCAGATTTCT 420
AAGTTCAAGG CCATCCTGGT CTACAGAGTG AGTTCCAGGA CAGCCGGGGC TACACAGAGA 480
AACCCTGTCT TGAAAAAAAC AAAATAAGTA AATAAATAAT AAAAACAAGA CTAGATGTGG 540
TGGCACCTAT CTTTAGTCCC AGCAGGTATA TTTCTATGGG CTTAGTTAGG GCCAGCCTGG 600
TCTACTCAGT GAATCTCAGA CCAGCCAGGA TTACACAGAG AGAGACCTTT CTAAAATTAA 660
AAAAAAAAAA AAAAGTCGGG CAGTGGTGGC ACATGCCTTT AATTCCAGCA CTTGGTAGGC 720
AGAGGCAGGC AGATTTCTGA GTTCGAGGCC AGCCTTATCT ACAAAGTGAG TTCCAGGACA 780
TCCAGGGCTA TACAGAGAAA CCCTGTTTCA AAAAAACCAA AACAAAACAA AACAAAAAAC 840
AAAAACAAAC AAGAAAAGAA AAAGAAATAA AGCAAAACCC AAAACCAGTA AAGACAAAAG 900
CAAACACAAA AACAAAAATA GCCCTATCAT ATCCTGCTTT CCAAATGGGG TATCTGAGGC 960
TGGGAAAGAG CAAGATACCT TCCCAGAGGC ACACAGCAGG TGAGCACCCT CAGAATTTGC 1020
ACTTACCTAT AGTGGGTTTT AAACTCACCA CTAACTCCTG GCTCCCTGTT ACAGAGGTCA 1080
TTTGAGACCC TCAAATCTAA AAGGTGTCAA GCAGCCAGGC TGGACCCCAA CCCCCATGGG 1140
GCAGCCACTT 1150