EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-34154

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr7:20265000-20266650

Target genes

Number: 26
Name	Ensembl ID

Snrpd2	ENSMUSG00000040824
Mir330	ENSMUSG00000065543
Ercc1	ENSMUSG00000003549
Ppp1r13l	ENSMUSG00000040734
Ercc2	ENSMUSG00000030400
Mark4	ENSMUSG00000030397
Bloc1s3	ENSMUSG00000057667
Trappc6a	ENSMUSG00000002043
Ppp1r37	ENSMUSG00000051403
Gemin7	ENSMUSG00000044709
Zfp296	ENSMUSG00000011267
Gm17375	ENSMUSG00000092002
Clasrp	ENSMUSG00000061028
Relb	ENSMUSG00000002983
Clptm1	ENSMUSG00000002981
Apoc4	ENSMUSG00000074336
Apoc1	ENSMUSG00000040564
Apoe	ENSMUSG00000002985
Gm20512	ENSMUSG00000092381
Tomm40	ENSMUSG00000002984
Pvrl2	ENSMUSG00000062300
Gm16175	ENSMUSG00000087206
Gm16174	ENSMUSG00000087593
Gm19345	ENSMUSG00000092216
Gm16184	ENSMUSG00000089886
Pvr	ENSMUSG00000040511

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

FOSL2	MA0478.1	chr7:20265053-20265064	CTGAGTCATCC	-	6.32
JUNB	MA0490.1	chr7:20265053-20265064	CTGAGTCATCC	-	6.14
LMX1B	MA0703.2	chr7:20265726-20265737	ATTTTAATTAA	+	6.62

dbSUPER

Number of super-enhancer constituents: 2
ID	Coordinate	Tissue/cell

mSE_02436	chr7:20254698-20279346	Macrophage
mSE_08716	chr7:20259966-20268024	Liver

Enhancer Sequence

TGAACTCTGG TCCTCTGTAA GAGCAGTGCA TGCCCTTAAC TATGGGGCTA CCACTGAGTC 60
ATCCCTCTAG CCTATTGTTA TTGTTATTAT TGTTGTTGTT GTTATTTTGA GACATGGCCT 120
CTTATAGTTC CAGATGGCCT CGAGTGTCCA AGGATGACCT CTGCCATTAA ACTGCTGATC 180
CTCTAGACTC CACCTCCAAA ATGTCAGGCT GATGGGTGTC TAACCCCATG TCTGTTTTAT 240
GACAGGATAG GGCTAGAACC CGGGTTTGGG CATGCCACCT AAGCTCCACC GAGCCACATT 300
CTCTGCTTGT CTAGAAACTT CCTACATAGC TGAGATTAGC CTTGAACTCC TGATCCTCCT 360
GCCTCCACCT CCCAAGCACT GGGGTTCCAG GAAACACACC CAGACCACAC ATGAACTCTA 420
GTTCCAAGAC CCTTCTGAAG TCCCATCAGT GACTTCACTA TTTCCTGTTC TGTGAAAGGG 480
GCACTGAGCT AAGCCAATGA GGAGTACACG GGAGTTGCCG GCTGGGCATC CCCTCAGCAC 540
TGTCTTGGGA GATACATGGG GAATTTTTTT GGGGGGGGGG GTTCCGAGAC AGAGTTTCTC 600
TGTGTAGTAC TGGCTGTCCT GGAACTCACT CTGTAGACCA GGCTGGCCTC GAACTCAGAA 660
ATCCACCTGC CTCTGCCTCC CAAGTGCTGG GATTAAAGGC GTGCACCACC ACTGCCCGGC 720
AATTGTATTT TAATTAATTT ATTTATTTTA ATGGTACTGG ATGTTGAACC AAAGGCCTCA 780
TGCATGCTAA GCTATAACTC CAGGCCATTC TGTCTGAAAA TTAAAAGAAA AAAGGGCTAG 840
AGAGATAGCT CAGCTGTTAA GGGCACTGGC TGCTCATTAA GAGGACTCAG TGCTCTTCCA 900
GAGGACCCAG TTCTTCAGTT CTCAGCACCC ACATGGCAGC TCACAACTGT CTGTAACCCT 960
AGTTCTAGGG GGTCTGACAC ACTCAAACAG TCTAACGTGT AGGCAAGACA CCAACACACA 1020
TAAAATAAAG TAGAATAAAA TAAAATAAGA AGAAAAAGTT TTAACTCATT TATGTGTGTA 1080
TATGTGTATG TGTAATATGT GTTTCTGTGT GTGAGGTCCT CTGTGTCTCA TGATCCTCCT 1140
GTGGAGGTCA GAGGACAACC TTTTGAAGCC TGTTTTCCCT TCCACCACAT GAGTTCCAGG 1200
GACTAACCTC CGGTCCCAGG CTTTTGTGGC ATGCACCTTG ACCCACTGAG TCATCTCATG 1260
GGTCCCAGTT TTCTGTACTT TTAAAAACTG AGTGTCGGGG TGGGGCTAGA GAGATGGCTC 1320
AGAGGTTAAG AGCATTGAGA TACAATGAGT TCAATTCTTA GCAACCACAT GTAGGCTCAC 1380
AACCATCTAT CTGTAATGGC ATCCTTCTGG TGTGTGTGAA GATAGCTACA GTGTACTCAT 1440
GTACACTCTA AAAAAAACCC ACACAGCCGG GCGGTGGTGG CGCACGCCTT TAAGCCCAGC 1500
ACTTGGGAGG CAGAGGCAGG CATGACTGTG TGTGCATGTG TGTGTACGCA TGTGTGTGTC 1560
ACGTTCCTCT TACATGGCTA CTGACCCACT GATGAAGCCA CAGTCGTGCC CCACTCAGAG 1620
AACCCCACCT CCAGCAGCCC CCCAACTCCT 1650