EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-21245

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr2:30003040-30004140

Target genes

Number: 31
Name	Ensembl ID

Coq4	ENSMUSG00000026798
Trub2	ENSMUSG00000039826
Urm1	ENSMUSG00000069020
Cercam	ENSMUSG00000039787
2600006K01Rik	ENSMUSG00000039798
Odf2	ENSMUSG00000026790
U6	ENSMUSG00000088348
Gle1	ENSMUSG00000019715
Spna2	ENSMUSG00000057738
Wdr34	ENSMUSG00000039715
Set	ENSMUSG00000054766
Pkn3	ENSMUSG00000026785
Zdhhc12	ENSMUSG00000015335
Zer1	ENSMUSG00000039686
Tbc1d13	ENSMUSG00000039678
Endog	ENSMUSG00000015337
D2Wsu81e	ENSMUSG00000039660
Ccbl1	ENSMUSG00000039648
Lrrc8a	ENSMUSG00000007476
1700084E18Rik	ENSMUSG00000052222
Phyhd1	ENSMUSG00000079484
Dolk	ENSMUSG00000075419
Nup188	ENSMUSG00000052533
Sh3glb2	ENSMUSG00000026860
Fam73b	ENSMUSG00000026858
Dolpp1	ENSMUSG00000026856
Gm16323	ENSMUSG00000087435
Crat	ENSMUSG00000026853
Ppp2r4	ENSMUSG00000039515
Ier5l	ENSMUSG00000089762
Mir3089	ENSMUSG00000093091

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr2:30003576-30003588	GTTTGTTTGTTT	+	6.32
Nr5a2	MA0505.1	chr2:30003477-30003492	AAGGCCAAGGCCAGC	+	6.41

Enhancer Sequence

AGCTGGTGAG GACCTGACTC ATGGACAGGA CGCACAGGCC AGGGACACAG TAGTTCTGCC 60
TTGAATGTGG GGGCTGGAAG TGGCTGTAGT TGAGCAATGT TGGGCTGGCC CAGCTCCAGG 120
GAGCACTGAC CCATGTGCTG AGACAGGCCT GGGAGGCCTG GCAGCTGAGC GTAGAAGACA 180
TTAAGTAGGC TGGGAGTGTG AAGTTAAGAA TGGTACTTAC AGGCTGAACG TGATGGTGCA 240
TGCTTTCAGC CTTGCAAGCC AGGAGTACGT AATGAGACCT TGTCTCAAAA AACAAATCCA 300
GCCTTGAGAG GCAGGAGTAG GTGGATCTCT GAGTTCCAGG CCAGCCAGGG ATCCACAGAG 360
AAACCCTGCC ATGAAAAAAA AAAAAAAAGG AAGAAAAGAG TGTTGCCGGC AAGATGGTGG 420
AGCAGGTGAA GGTGCTGAAG GCCAAGGCCA GCACATTCAG AGGTCTGGTG GCCTCTGCTT 480
TCCAAGTGCT GAGACTGAAG GGGCGCGCTG CCACCTCCCA GCTGAAGCTT GCATTTGTTT 540
GTTTGTTTTC CAAGACAGGG TTTCTCTGTG TAGCCCTGGC TGTCCTGGAA CTCACTCTGT 600
AGACCAGGCT GGCCTCGAAC TCAGAAATCC GCCTGCCTCT GCTGGGATTA AAGGCGTGTG 660
TGCCACTAAC ACCCAGCTTT TTTTGGTTGG TTTTTTTTTT TTTTAAGAGT TCTGTTTTTT 720
ACTGTGTGCT GTATACTTTG TTACCACCCC GTGTGGCTCA CAGGGTGCTG TTCTCTTGCG 780
GATCCCTCCT CTATAGGGTT GTTCTGTGGT TCTGTGAGCT GAGCACAGGT ACAGTGCCTG 840
GTACTGGCCT TCATGCTGCT CCACAGAACC AAGGGGGGAG ATGCATGAGT TGACATCTTC 900
TCCAAATGGA AAGACTAGTG TAAGATTCAG GAGTTTTAGT GTGCCTTGCA GAAATAACAA 960
CATTGGCTGG AATTGCCCTG TTAGTGGACC CAGGCTCTGT ACGGCCCCTC TGAGGGCCCT 1020
GAACAGGGCT TGCGCCTAGG CTGTGTCTTG TTTATTTAAA TAGCTGACGT GCGCTCCCTG 1080
ACACACACCC TCTGTCCCCC 1100