EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-19169

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr19:3647650-3649400

Target genes

Number: 25
Name	Ensembl ID

Mrpl21	ENSMUSG00000024829
Ighmbp2	ENSMUSG00000024831
Cpt1a	ENSMUSG00000024900
Mtl5	ENSMUSG00000024905
Ppp6r3	ENSMUSG00000024908
Lrp5	ENSMUSG00000024913
1810055G02Rik	ENSMUSG00000035372
Suv420h1	ENSMUSG00000045098
Chka	ENSMUSG00000024843
Gm16066	ENSMUSG00000082848
Tcirg1	ENSMUSG00000001750
Ndufs8	ENSMUSG00000059734
Aldh3b1	ENSMUSG00000024885
Unc93b1	ENSMUSG00000036908
Acy3	ENSMUSG00000024866
Nudt8	ENSMUSG00000024869
Ndufv1	ENSMUSG00000037916
Gstp1	ENSMUSG00000060803
Cdk2ap2	ENSMUSG00000024856
Aip	ENSMUSG00000024847
Tmem134	ENSMUSG00000024845
Coro1b	ENSMUSG00000024835
Rad9	ENSMUSG00000024824
Pold4	ENSMUSG00000024854
Kdm2a	ENSMUSG00000054611

TF binding sites/motifs

Number: 8

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SP2	MA0516.2	chr19:3649162-3649179	CTCTGCCCCGCCCACCC	+	6.2
SP2	MA0516.2	chr19:3649327-3649344	CTCTGCCCCGCCCACCC	+	6.2
SP2	MA0516.2	chr19:3649283-3649300	CTCTGCCCCGCCCACTC	+	6.56
SP3	MA0746.2	chr19:3649121-3649134	TGCCCCGCCCACC	+	6.05
SP3	MA0746.2	chr19:3649165-3649178	TGCCCCGCCCACC	+	6.05
SP3	MA0746.2	chr19:3649209-3649222	TGCCCCGCCCACC	+	6.05
SP3	MA0746.2	chr19:3649330-3649343	TGCCCCGCCCACC	+	6.05
SP3	MA0746.2	chr19:3649363-3649376	TGCCCCGCCCACC	+	6.05

Enhancer Sequence

GTGTGTGGAC TGGTGGGGAC AGAACAGGAC AGGATGGAAG GAAGTTGCAG TACAAGCTGT 60
GAGCGCACCA CTGCCCAGCC ACTCCCTCCC ACGGGGGCTG GCATCCTACA CATCCCATGT 120
ATCCTACAGG ACAACTGTCA GATGTCCCTC CAGCCCTACA CCATGACTCG TCCTCCTAGT 180
CCTACCTAAC CGCACTCAGA CCACCCCCCA TGGAGGGCCT TCAGCCTCAG CAGCAGTTCT 240
GTAATTTCTC AGAAACCATC CCAGACCTGC CCTGCCCTGC AGGGCACATT CCCCAAGCTA 300
AGCTTTCTCC AACAAGAAGA TAAACTTTCA AAGGATGCTA CTTTCCCCAG AAAAGTCACC 360
CGCCATGCTT CCATGGAAAT TCTCAGGACC GCTTAGGCAG CCATGCCTGG GAACCCTGGG 420
TTAGTGGACT CCTGAGCACA CCCTGTCTCT TTAATCTGCC TGGACCCTGC AGACTCAGTC 480
CACATTGGGT TACCACATTT AGGCCCCTCC CCCAGGCTCT TCTGTGACCA CTGTACAGTT 540
GAATCTAACA AAGGTTCCCA GACCCTCCTT CTACCTCAGG AATGTGGGGC TCAGCACCCC 600
TGCAACTCTG TCAACTGGAA CTGAGTCTCC TGCAGTTGAC CTTCGCCCTC ACAACACACT 660
CAGTGAAGAG TGGGCAGCTC CAAGCAAAAG AGTTCAAGAA CTATGTACTC TTGACAGGGT 720
CAGGGACCAC CTCCCCCACC CCTCCTACAC TAACCTTTGT GGCTTGAGTT CCTAGACCCA 780
CATTCAAACC TTCTATAAAG TGTGGCCAGA AATACTGATC CTTGGTGCAT GTGCAACTGA 840
GTGAGCCTAG AATGGCCTCT TCCCGCCTCC CATCCAACCC CCTCAGTCTG TCACAGAAAC 900
TCAGAGTCAC CGTCAGGGAC TTCTATTAAG ATTCTACCAT ATAAGACCCC AGGCTGAGAA 960
GTAAGACTCT GAGCAAGTAT TTTACACTTC AGGGCTCTAC TGGGCCTTCA CAATGGCACC 1020
ACCTGCCCTA GAAAGCCTGA AACAGCTCTA GAGAGGCCCT GTCCACCGTA CTAGCCTGCC 1080
TAGACAACCA CATGCAGAAA CACTGTCCAT GTACAAGCAT ACTCACATAT ACCATGTACA 1140
CACACACGCA CACGCGCACA CACACACACA CACACACACA CAAGCTCCTC CTTCTATCCT 1200
AGCATTCACT TCTCTGCAGG GGTGCCTCTC TGTGGGTGCT TCTGTAGGAT AGAGGCTTGG 1260
TCTGATCTCT TCTTAGCCCT GTCTACCAGC TCCCTACTGC ACTGCCTGGA TCCACTCTGC 1320
CCTACTGCTT GACTATACTG CCCCACTGAC CTGACTGAGC CCCACATCCG GGCTATATCC 1380
TTCCCATCTC TACCCTATCC TACCTGTACC AGCAGATCTG CCTGATGTAG CCTCTCCGAC 1440
CTGCAAGCCC TACCCTGTCA TGCTTATCCC CTGCCCCGCC CACCCCATCC CCAGTGCCCA 1500
CCCCTGCCTG TCCTCTGCCC CGCCCACCCC ATCCCCAGTG CCCACCCCTG CCTGTCTTCT 1560
GCCCCGCCCA CCCCATCCCC AGTGCCCGCC CCCTGCCCGC CCACTCCATC CCCAGTGCCC 1620
ACCCCTGCCT GTCCTCTGCC CCGCCCACTC CATCCCCAGT GCCCACCCCT GCCTGTCCTC 1680
TGCCCCGCCC ACCCCATCCC CAGTGCCCAC CCCTGCCCCG CCCACCCCAT CCCCATTGCC 1740
AGCTCACACT 1750