EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-14440

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr15:103031500-103034380

Target genes

Number: 15
Name	Ensembl ID

Hoxc9	ENSMUSG00000036139
Hoxc6	ENSMUSG00000001661
Hoxc4	ENSMUSG00000075394
D930007P13Rik	ENSMUSG00000086435
Smug1	ENSMUSG00000036061
Cbx5	ENSMUSG00000009575
Hnrnpa1	ENSMUSG00000046434
Nfe2	ENSMUSG00000058794
Copz1	ENSMUSG00000060992
Gpr84	ENSMUSG00000063234
Zfp385a	ENSMUSG00000000552
Itga5	ENSMUSG00000000555
Gtsf1	ENSMUSG00000022487
Nckap1l	ENSMUSG00000022488
Pde1b	ENSMUSG00000022489

TF binding sites/motifs

Number: 19

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Crem	MA0609.1	chr15:103033012-103033022	TATGACGTAA	+	6.02
FOXA1	MA0148.4	chr15:103033897-103033913	TCTTAAATAAACAAAC	+	6.39
FOXD2	MA0847.2	chr15:103033898-103033911	CTTAAATAAACAA	+	6.29
Foxd3	MA0041.1	chr15:103032495-103032507	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr15:103033905-103033917	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr15:103033707-103033719	AAACAAACATAC	-	6.37
Nr5a2	MA0505.1	chr15:103033038-103033053	GTTTTCAAGGTCAGC	+	6.13
Nr5a2	MA0505.1	chr15:103033258-103033273	GAGTTCAAGGCCAGC	+	8.25
PKNOX1	MA0782.1	chr15:103032946-103032958	TGACAGCTGTCT	+	6.37
PKNOX2	MA0783.1	chr15:103032961-103032973	TGACAGCTGCCA	+	6.02
PKNOX2	MA0783.1	chr15:103032946-103032958	TGACAGCTGTCT	-	6.22
TGIF1	MA0796.1	chr15:103032961-103032973	TGACAGCTGCCA	+	6.04
TGIF1	MA0796.1	chr15:103032946-103032958	TGACAGCTGTCT	-	6.14
TGIF1	MA0796.1	chr15:103032961-103032973	TGACAGCTGCCA	-	6.18
TGIF1	MA0796.1	chr15:103032946-103032958	TGACAGCTGTCT	+	6.37
TGIF2	MA0797.1	chr15:103032961-103032973	TGACAGCTGCCA	-	6.07
TGIF2	MA0797.1	chr15:103032946-103032958	TGACAGCTGTCT	+	6.18
TGIF2	MA0797.1	chr15:103032946-103032958	TGACAGCTGTCT	-	6.27
TGIF2	MA0797.1	chr15:103032961-103032973	TGACAGCTGCCA	+	6.44

Enhancer Sequence

AGGTCAATCA GAGACAGCAA TGTTAAGAGA TACTTTTGCA ATAAGATGTA GTCATCTTTT 60
CTGGTATTCC TTGCAAATGA TTAAGAAGGG ACCCCCACGC CGGGCATGGT GGTGCACGCT 120
TTTACTCCCA GTACTCGGAA GGCAGAGGCA GGTGGATTTC TGAGTTCGAG GCCAGCCTGA 180
TCTACAAAGT GAGTTCCAGG ACAGCCAGGG CTATACAGAG AAACCCTGTC TCGAAAAACC 240
AAAAAAAAAA AAAAAAAAAA AAAAAAGGAA GGGACCCCCA CAAGTCTTTA GCACCCCAGG 300
AGTCTCAAGA GAATCACCTG GGCACTCCAT CCCTCTAATC CACTCAATCT CATCAGCACT 360
ACAGACACCA CACAAGCTCA TTTTCACTCT CTCAAACTTC AGATATGCTT TCTCAACTAT 420
ATGCTTTTAG ACTTCTAATT TATCTTAACA GTGACCAACA GTTTTAATAT TTCACAATCA 480
TCTATACTGT AAAGCAGGTA AGAAGAATGC AAGACCCATA GTCTAAAAAG GGCAAATTTC 540
AAAGATCACA AACACTAGTT CGCATATAAC TTGAGAGAGG TCTGCTCAGA CAGGCTATTA 600
ACATTAACTG GGATTGATCT GAGACTGCAA ACAACTGAAT GGATAACTCA GGAGAATGGA 660
TGATCCAGGT GTAATGCAGG GGTCAAAACA AAAAGTCTAA TTTTATACAT ATCACAATTT 720
TTCTAAAATT TACAAGAGAT AATGCAAGCT CATTCATCAG CAACACAAAG AAAACTTAAG 780
ATTTACCATA AGAACCAAAT CCCAACCCTC TCTGATCATC TTACTTGCCT TCGAGATACA 840
AAAGCAGGCC AGTGAGATGG CTCAGTGAGC AAAAAGGCTT GCAGACAAGC CCAACAACCT 900
GAGTTTGATC CCTGCAACTC ACATGGTGTG TGGAGAGTAT GTATCAATGC CCACATATTC 960
CCTGATCCGC AGCCCCCAAA CAAGGAGCAA ACACAAAACA AACAAACAAA TTATTTTGAA 1020
ATAGATAAAC AAAAGTTTGC ACGTTCCTGG TGGTTCCCAA AGATACCAGA ACCCACAACA 1080
GGAAGAAAAT CTTAGCCATG GGTTAATGGG AAGACACTGG CTCTTTAAGA CACAACCTCT 1140
TTGGGGAATT TAAAGAGAAT TGGTTCCCAG ATGCAAACAC AGCTGCTCAC AGCTGGAATG 1200
CTGACACAGG GACTAAGTCA TACATCATCT CTGGCAGCTG GAAACAGTCT GCTTACATCG 1260
GGAGGGAAAT GGAAAAAGAA TGTTCAAGCT GCTGAAAGGA GCCGAGGCAA GAAAAACACT 1320
AAAATCATCA CAGGCAGTAA TCTTAAATCA GGCATAAAAC CAACTAAGAA ATTTCTTCTT 1380
AGTCTAAAAA AAGTGGTCTA AAAAAAGGCA ATCTTCCCAT ACCTTGAAAA CACACGACTA 1440
CTATCATGAC AGCTGTCTAC CTGACAGCTG CCAGTATTGC TGAGAATGCT ATCAAGGGCT 1500
CCAGACAAAC ATTATGACGT AAAGGATGTC TGGAGGTTGT TTTCAAGGTC AGCAGCTCCA 1560
GAACCTAGAC ATGAAGCTCT CTGAAGTGGC CAAAGACTCA AAGCCAGATT ACCACCTTTA 1620
AAAGAACAAA GCCCCTAAGT TGAAGAAATG TGTATTATCT CTCACAAATA TATAGTTAAA 1680
AGTCTTTTGT TGTAGCTGGG CAATGGTGGC GCATGCCTTT AATCCCAGCA CTTGGGAGGC 1740
AGAGGCAGAC AGATTTCTGA GTTCAAGGCC AGCCTGGTCT ACAGAGTGAG CGCCAGGGCT 1800
ATACAGAGAA ACCTTGTCTC AAACAACAAC AACAACAACA ACAACAAGTC TTTGGTTGTG 1860
TTACTTGCTA CTTTAACTAG AAATGAACCA AATGACAAAA GCCAGAATAC AAATGGCTAA 1920
TAAAAACATA ACAAAAGGTG ACTACCACCA AGCCTAAAGT TCCAACTTCA ATTCCCAGGA 1980
CCAACCTGGT AGAAGAAGGC AACTGACTTG TCCAAGTTGT TCTTTACCCT CCATACATGT 2040
ACAGCTGCAA AAATGCTCAC ACACACATAC AAAATAATAA AATATATAAA TAAAATTATA 2100
GAAGGGTGAG GGGAGATTGG GAGACAGAGA CAGAGTTTGA GACCAGCATA GTCTACATAG 2160
TGAGTTTCTA GCCAGCCCAG GATCATGCAT GTTTGAGGCC CTATCTCAAA CAAACATACA 2220
AACAAACCCT AAAACAAAAA ACAAAAAAAT TCCTTATCAG TACAGTTTAT CATAATCAGA 2280
ACATGGCATA GGTTACAGCC CACAGAAGGC AGATACAAGA GGATCTCTAT GAATTAGAGA 2340
TCAGCCAGGT CTATATAGCA AGCTCCAGGA CAGCCATGAC TATACAGAGA GACCTTGTCT 2400
TAAATAAACA AACAAACAAA AGTTGTAAAA ATAAAATTAA CAGGAGAAAG AAGTCAGAAA 2460
CAGCCCCCAT AGAGTCCAAG AATTACATAT AACCTTTATA AAACCCCATT GCCTCAGTTT 2520
ACCCACAGAA ACTCTCATTT AACTAATGTA AGGCTCATCT TGGGTACTAA GTTTTCACTT 2580
TTTAAAGACC TGCTGGGTGA TTCTGAGGTA TAGTCACAAC TGAGAGTAAC AGTGTAGAAA 2640
AGTGGGCATC TAAGCATAGC AGAGGTAAAG AGGGAATCAG AGCCGGGTGC TCTATGGGCT 2700
TGTGCTTATA TTATATTACA TTGTAAGTAC ACAGGCTTTA TAACCCTGAA ATAAATGGGA 2760
AGAGGGAACG CTACAGCAAA GATGCAAAAG AAAAAACGGG GCAATATGTT GTTTATGTTT 2820
TTACCTTCAA TCTAAAAATC AGGTAAAAGC AACAAATCAA ACCAAACTTC ATAATTAAGT 2880