EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-09313

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr12:113026220-113027530

Target genes

Number: 16
Name	Ensembl ID

Cdc42bpb	ENSMUSG00000021279
1200009I06Rik	ENSMUSG00000021280
Tnfaip2	ENSMUSG00000021281
Eif5	ENSMUSG00000021282
Snora28	ENSMUSG00000064493
Mark3	ENSMUSG00000007411
Trmt61a	ENSMUSG00000060950
Bag5	ENSMUSG00000049792
2810002N01Rik	ENSMUSG00000037787
Gm15995	ENSMUSG00000090193
Gm15996	ENSMUSG00000090026
Klc1	ENSMUSG00000021288
Xrcc3	ENSMUSG00000021287
Zfyve21	ENSMUSG00000021286
Ppp1r13b	ENSMUSG00000021285
2010107E04Rik	ENSMUSG00000021290

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2C2	MA0504.1	chr12:113027384-113027399	TGCCCTCTGACCTCT	-	7.55
Nr5a2	MA0505.1	chr12:113026863-113026878	ACTGTCCTTGAACTC	-	6.44
PLAG1	MA0163.1	chr12:113027327-113027341	GAGGGCTAAGGGGG	+	6.12

Enhancer Sequence

TGCTCCCAGC TGGGCCAGCT CTACTGGGAC TTGTGGGCTG GGGCTCAAGC AGAGCTCTCG 60
CTGCTGCCCC TTTGGTCCTG GGGACCGAGT CAGGCAATCT GTGGCTGTCA TTAGCTGTGA 120
GGCTGCCTCC TAGGAGCAGG GCTTACAGTT TAGGGCTACT CTAGATTGCA GGTAGGTTGG 180
AGCAAGAGGA GCTACAGGGG CCTCAGAGCT CCAGAAGGGG TGTGAGTGTA TCATGAGGAC 240
GTTCCCCACC TGGCAGCCGC AGAAGCTCTG GACAGGACAG CTTCTGTGCC CCATGAGCGT 300
CCCGATACAT ACAGCAGGGC AGGGTATGGG CATGCGCCAG GGTTAACATT GTTGGTATAG 360
GAGACAGATT ACCTTGTTTC CTAGGCTGGC CTCAATCTGT AGCTGGGGTT AACCTCAAGC 420
TTCCACTCTT CCTGCCTTCA CCTCCCAAGG GCTGAGGTAG CAGGCAAGCG CCATCAGGTC 480
TGGTGTGTGT GGTGTTGGTG ATAGACCGAC CCAGTGTACA TGCTGGGTGA GCACTTAGCT 540
GCGTTTCCAG CCCGGCCCTT CACGTGTGTC CCTCACTACC TGGGGCTCAG TATTAGCTTA 600
CAACACTTGC TCTGTTTTGA ATAACAGGGC CTTATGTAGC CAGACTGTCC TTGAACTCTT 660
TATCCTCCTA TTGCTGCTTT GTAGTGCTGA GATTACAGGC ATGCTTTCAT AGAGTACAAT 720
GTTCTGTGTC ACAGAGTTCA GTTCTGTGTG TAAGCTCCTG AGTTTTGGTG ATATGGACTC 780
ATATAGCGCA GACCCCCACC CCCATTCTCG TGACCCTAGG GAGCCTGAAT CCCACCCCCA 840
AATGCGCTCA TCTGCGTTTG TCCCATTACA TAAGAATTGG TGTCTGGCCG GGTGTGGTGG 900
CGCACACCTT TAATCCCAGC ACTCAGGAGA CAGAGGCAGG CAGATTTCTG AGTTTGAGGC 960
CAGCCAGGTC TATAGAGTGA GTTCCAGGAC AGCCAGGGCT ATGCAGAGAA ACCCTGTCTC 1020
AAAAAACAAA ACAAAACAAA AAAAAACAAC AACAACAAAA CCCAAAAACA ACAAAAAAGA 1080
ATTGGTGTCT GTGGCGCAGT GAGAAGTGAG GGCTAAGGGG GAGACACCTG CATGAGGGCG 1140
GAAAGAGGAA GCCAACTGAC CACATGCCCT CTGACCTCTT CCACATGGCT CTGTAGCAGG 1200
CACGCAGCAA CAGCAAAGAG AATTTGACCT TGTCCCTAGT GAAGCTCAGA TACTGAGACG 1260
CCTTCTGAGA TGTCAGTGCT AACGGGCCAC CCGTTCTCCC CTGCCTGGCT 1310