EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-09284

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr12:112564410-112565620

Target genes

Number: 14
Name	Ensembl ID

Traf3	ENSMUSG00000021277
A230087F16Rik	ENSMUSG00000086210
Cdc42bpb	ENSMUSG00000021279
1200009I06Rik	ENSMUSG00000021280
Gm10425	ENSMUSG00000072830
Tnfaip2	ENSMUSG00000021281
Eif5	ENSMUSG00000021282
Snora28	ENSMUSG00000064493
Mark3	ENSMUSG00000007411
Trmt61a	ENSMUSG00000060950
Bag5	ENSMUSG00000049792
2810002N01Rik	ENSMUSG00000037787
Klc1	ENSMUSG00000021288
Zfyve21	ENSMUSG00000021286

TF binding sites/motifs

Number: 11

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Arid3b	MA0601.1	chr12:112564902-112564913	ATATTAATTAG	+	6.02
Creb5	MA0840.1	chr12:112564686-112564698	TGTGACGTCATT	-	6.11
IRF1	MA0050.2	chr12:112564726-112564747	CCTCGCTTTCTCTTTCTTTCT	+	6.76
Lhx3	MA0135.1	chr12:112565332-112565345	AAATTAATTAACT	+	6.74
NFKB2	MA0778.1	chr12:112564519-112564532	AGGGAATTCCCCC	+	6.28
NFKB2	MA0778.1	chr12:112564519-112564532	AGGGAATTCCCCC	-	6
NR2C2	MA0504.1	chr12:112564610-112564625	TGACCCTTGACCTGC	-	6.33
Nr2f6	MA0677.1	chr12:112564610-112564624	TGACCCTTGACCTG	-	6.52
RXRB	MA0855.1	chr12:112564610-112564624	TGACCCTTGACCTG	-	6.24
RXRG	MA0856.1	chr12:112564610-112564624	TGACCCTTGACCTG	-	6.53
Rxra	MA0512.2	chr12:112564610-112564624	TGACCCTTGACCTG	-	6.46

Enhancer Sequence

AAACCGCTCC TGGGGAGGAG GGGCAGCCAA AGACTGTCAG GAAAACCCAA GTCGAGGACA 60
GCACAAGAAT AATCCTGACT TCATCATTAA CCAGGTGTAA GCTGAAGCTA GGGAATTCCC 120
CCACCCCCAA GCCCTGAGAC AGGGTTTCTC TGTGTAGTCC TTGTTAGTAC CAGGACACTC 180
CAAGCCCCAG CCTAACCATG TGACCCTTGA CCTGCATTGC CAGGACAACG ACCCTCAATC 240
CCACAACCCA CTTGGCTCAG TTCCCACCCT CACTGGTGTG ACGTCATTTT CTGTATAAAT 300
TAGGGGATCA CCCCCTCCTC GCTTTCTCTT TCTTTCTTCT CTCCCCCTTT CTCTCTTTTT 360
CCTCTTCTCT GCCCTTCTAC CCACTTCACC GCCCCTCTAT CTCTGCACAA TAAACCTCTC 420
CCACGTGGAA CTACCTTGGC CTGGTCTGCT GTTTGGTTTA TCCGCTCAAA ATATATAGAT 480
TAATATTATT TGATATTAAT TAGCACATCA GTCCTGGCTG TCCTAGAACT CTGTAGACCA 540
GGCTGGCCTC AAACTCAGAG ATCCACCAGC CTCTTCCTCT GCCTCCTGAG TGCTGGGATC 600
AAAGGTGTGT GCCACCACTG CCCCACTGGC TAAAAGAATT TTAATTCCAA AATGGCAAAC 660
AAAAAAAGCA TTCCCTTTGG GCCTGCAAGA CAGCTTGTGG GTAAAATACA CCTAACCCTA 720
ACCGAGTTCC AGGTGCACTT CCCACAGCTC AGGTAAGCCA CCGTACATGG GGACCAGTTC 780
CATTCCTGTC CTCGCGGCGC CTGGTGTTTG GAGTTTGATC CCAGAACCAA CAGAGAGAGG 840
AGGAAACGCC ACAAAGTCAT GCTCTGGCTT CCAATATGCA CTGTGGCACA TACATCCACA 900
CACGTGTCAC ACATACATAA GTAAATTAAT TAACTATCAT AGCTGAGCAG TTAAGTACTG 960
CCCACAGTGA GCCTGACAGA CTTGATTTCT GGCTCTCAAA ATACCAAGGA GCACAGACAA 1020
GTGTGCCATG GGGCCCGCAC AGCGCTTGGC TAACACAATG GGAAACGCAC TGCAGGGCTG 1080
GAACACAGGA GACATCTTTG AAGCATGCCT TCCTTTCTGT CCCATGTGTG CAGTGTCCCC 1140
ATATCATGTG TGCCCCTGTC TCCCTGTCCC TCCCACCCCA GCCCGTGAAG GCGCTGGAAC 1200
AGCGTTCGCA 1210