EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-09170

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr12:105488960-105489680

Target genes

Number: 7
Name	Ensembl ID

Serpina3c	ENSMUSG00000066361
Serpina3e	ENSMUSG00000091553
Serpina3f	ENSMUSG00000066363
Serpina3g	ENSMUSG00000041481
Serpina3h	ENSMUSG00000041449
Serpina3i	ENSMUSG00000079014
Serpina3n	ENSMUSG00000021091

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

KLF14	MA0740.1	chr12:105488965-105488979	AGGTGGGCGTGGTC	-	6.87
Klf12	MA0742.1	chr12:105488964-105488979	AAGGTGGGCGTGGTC	-	6.99
PKNOX1	MA0782.1	chr12:105489587-105489599	TGACAGCTGTCA	+	6.92
PKNOX1	MA0782.1	chr12:105489587-105489599	TGACAGCTGTCA	-	6.92
PKNOX2	MA0783.1	chr12:105489587-105489599	TGACAGCTGTCA	+	6.92
PKNOX2	MA0783.1	chr12:105489587-105489599	TGACAGCTGTCA	-	6.92
SP1	MA0079.4	chr12:105488966-105488981	GGTGGGCGTGGTCAC	-	6.49
SP3	MA0746.2	chr12:105488966-105488979	GGTGGGCGTGGTC	-	6.48
SP4	MA0685.1	chr12:105488964-105488981	AAGGTGGGCGTGGTCAC	-	6.48
SP8	MA0747.1	chr12:105488966-105488978	GGTGGGCGTGGT	-	6.32
TGIF1	MA0796.1	chr12:105489587-105489599	TGACAGCTGTCA	+	7.22
TGIF1	MA0796.1	chr12:105489587-105489599	TGACAGCTGTCA	-	7.22
TGIF2	MA0797.1	chr12:105489587-105489599	TGACAGCTGTCA	+	7.22
TGIF2	MA0797.1	chr12:105489587-105489599	TGACAGCTGTCA	-	7.22

Enhancer Sequence

TTTAAAGGTG GGCGTGGTCA CTGCCTGGGA GTGGAGGGAG AGGAACTTGG TGGGGTAACT 60
TGTGTCCTTT ATGCTGCCTG TTGTAAAGTA GGTTTGGGAA GCCTTGCAGA AATGGGTGTG 120
TAATTTTTAT TACACACAGT CCTTACCTCT CTAAGATATT TAGATATAGT TATAATTCCT 180
GGAACACACA CATTACCCAT GCCTTACTAA GCCCACTGTC AATGGATTCC TGGTTATCCA 240
AGTCTTGGTT ACAGGACCCA GGTGTTTTAT AGCCACCACG GTTCGACCTT CTAATAAACT 300
CGTTCCCACT GAGGAGCACA TTAACAGACC TCAGAGAGGG AGGACTCAAC TCTTTTCTTT 360
TCTCCCAAAC CTTCTAGACA TGTTTCCCTC TAAGAACAAC ATGACCCCAA TCTCTCTCCA 420
GGCTCCAGGC TCACCATTTG CACTCTCATC CCTTGCTTAC ACACCTGGTT CTCAGTAGCT 480
CAATTCTCCA GGCTGAGGGG TAGACATTAG ATGTTGTTCT TTGCAAACTA AGCCTGTGGA 540
TCCCTTCTCA TTCATAGTTC TGTATCTCTC AAGGATCTTC TAATTATTAT AAAACTACTA 600
AAGGATACTG TGCTGTTGAA GGTATATTGA CAGCTGTCAT AACTCAGCAG TTGGTGCCAT 660
ATAGACTGGA GGTGTGGTCT CTGTGCTACT GTTACAATCT GATGATTAGC TCCACATTTA 720