EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02688

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:196542450-196544720

Target genes

Number: 4
Name	Ensembl ID

Plxna2	ENSMUSG00000026640
Cd34	ENSMUSG00000016494
A330023F24Rik	ENSMUSG00000073474
Mir29c	ENSMUSG00000065548

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ALX3	MA0634.1	chr1:196543884-196543894	TTTAATTAGA	-	6.02
PHOX2A	MA0713.1	chr1:196542925-196542936	TAATCTAATTA	+	6.32
PROP1	MA0715.1	chr1:196542925-196542936	TAATCTAATTA	+	6.14
Phox2b	MA0681.1	chr1:196542925-196542936	TAATCTAATTA	+	6.32
RELA	MA0107.1	chr1:196544366-196544376	GGGAATTTCC	+	6.02

Enhancer Sequence

AATCAGTTTT CATGTTTTCC TACAAATACT GTACTCAATA GCAGCATAGG TAGGCCTTAC 60
ATTAACTGTA AGATCTTTCT AAAGGGAAGG TAGTTGCAGC CAAGTGCTCC AATAATTAGT 120
TTCCCTGAAC CTTGATCATT ATTCAGAGAG AAGGAATTTG TCAGTCATTA AGTATGTTCA 180
TAAGTCAGGC AGTATATCTG TTTTCTATTA CTGTAACAAA CTATCTGAGG CTCTTTGAAC 240
TTTTAATTCA AAGAGGTTTT CGGGACAATG TCAAAACAGT ATGGTCTAAT TCCTAGTAGG 300
GCTTACCTGT TTCACAACAT CATAGGTATC ATCAATGACA TGAACATGTG TCAGAAGTGG 360
AGATAATGTG ATAAGACCAG AAGCCACAGA GGTGTGGGTT GGAGCTAGGT TTACTCTTTC 420
TTAACAACCC TTTTGTAAGA ACTAACTAGT ATCCTCCCAA GAATAACACC TTCAGTAATC 480
TAATTACATA CCAGTATCTC CCCCAACCCC AAAGGCTCTA CAGTACTTTG TAGCTTATGA 540
GGCTTGTAAG GCACACTCAA GTCATGTCAA AACTTCATAT GATATGACAA GAAGAATCCT 600
TTCTGTAATT TCACTTTATA ACACACTATA GCCAGTGTTA TTTTATGTCT TCCCTCTACA 660
CTTGTGTTCT CCCACCTTTT CCCAAAGATA TGGTACCTCT TCTATCTTTG GGACCATGTG 720
AGAATAGAAT CAGGTTTTCA ATTCTGCCTA GGCAGGTTTC CATCGCTGTA CAAAGCTAGA 780
ACCATCCAAT CTAGCACTCA GATCCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT 840
CTCTCTCTCT CTCTCTATGT GTGTGTGTGT GTGTGTGTGT GTATGTGTGT GTGTGTGTGT 900
GTCTCACTTT TCTCTCTGCC TCTCTCTGTC TCTCTATCTC TCTGTCTCTC TCTGTCAATT 960
AACTAAATGT AATTAAGGAA TAGTACTAGT AAGAAGTGTT GGGTCATTAG TGCCACCGAC 1020
TAACAAGTCA ATGTTAATGT ACTCTTAATA GATCTGTGGC TTGGCCAGTC CCAGGGGGAA 1080
AAACTTGGAA AGAGAATTCT GGGCCTGCTG TTAATTGTCC AGGTTCTCCA TCAAGAGAAG 1140
GCTGGCTCTT CCCTAGAAAG CTACCCCAAC TTCAGCAGTA TGTCAGTAGA TGTTATAAGC 1200
AGGAATACAA CTTGCTCCCA GATTTCAGTG TCTAATGGAA GTCAGTCAGT GAGTGCTGGG 1260
AAAGTTAGGC TAGGAGCCAA GTAAAACAGC AAGTAAGAAG ATGAAAAGAA GAGACATAGC 1320
CTTGATTCCA GCCCAGCTTG TCAGGCTGGC CACTCCCAGA AAGGGAATAC CACTCTGTCC 1380
TCAGGGTAGA TGGGAAGAGA GTGTAGGAAT GGAAGCAATT ATTCTATTTT ATACTTTAAT 1440
TAGATTGAAT TAGCAGAGGG AATACAGGCA TAAAATGATC CAGCGAAGGG TGAAATGGAA 1500
AAGGGGAGTC ACTGTGCAGA ATGGCTCCAT GCAGGCTGGA GAGAGCCTTG GGAAGAACAG 1560
AGGGCTGGTG ATGGCTGACA TTTCTAGAGA GGGTGGGGGC CTGGAATTCT ACTTTCCATT 1620
TAAAGGTCTA GAGAGGATGA ATCACATAGA GCTTAAGATC TGGTATGTAT GACTGATACC 1680
ACCATTGCAT AGATGCTTAT TATGTAACCA GAAAATTATG TAATTTTTTT CTAAGCCTCA 1740
GTTGCTTCAC CTGTATAATG GATCTAATAA AGCTGTGCTC TGAAGATAAG AGAACGGATT 1800
TAAAGTGCCT AGTGTATGTC TAGCACACAG TCTGCACTTC ATCATCAATG GTGCCGTTAG 1860
TAAAACTTAC TGGTATATCA GAGAAGACCA GAAGTGTCTA TTACAACCTA TGCCCAGGGA 1920
ATTTCCTGCT CCCAAGAACG GCTTGCAACC TGTTTTTGAT ACTGTAACCT GCCATCCCAA 1980
ATGACCAGTC AGAAGACTCT GGCCTAGCCA AACTGGACTG TGTGCTCATA ATCTGGTATT 2040
TATTTTTAAA AAAATCCAGC AATGTGCCCA GTAGACTAAA CAGACCCACT CTCTCAGAAC 2100
ACAGAAAGAC AGTTCCTAGC CCTTACGTGA GACCAATATT TCAGAATACA GGCATATGTG 2160
GAGAGGAGGA GGTTGTTCTA GGTCAGGTTA TCCCCAGGCC TTAGGGCACA TGTATGGACA 2220
TTTGGTTTGG AAGGGACCCT TCAGGGGTCT CTTCAGGTAG TAACCAAACC 2270