EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02403

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:182896660-182898870

Target genes

Number: 13
Name	Ensembl ID

Lin9	ENSMUSG00000058729
Acbd3	ENSMUSG00000026499
Gm17275	ENSMUSG00000090986
H3f3a	ENSMUSG00000060743
Pycr2	ENSMUSG00000026520
Tmem63a	ENSMUSG00000026519
2210411M09Rik	ENSMUSG00000085563
Ephx1	ENSMUSG00000038776
9130409I23Rik	ENSMUSG00000038768
Nvl	ENSMUSG00000026516
Cnih4	ENSMUSG00000062169
Wdr26	ENSMUSG00000038733
A430110L20Rik	ENSMUSG00000054135

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Gfi1b	MA0483.1	chr1:182897185-182897196	AGCTGTGATTT	-	6.14
RREB1	MA0073.1	chr1:182896712-182896732	TGTGGGGTGTGGGGTGGGGG	-	6.12
RREB1	MA0073.1	chr1:182896711-182896731	GTGTGGGGTGTGGGGTGGGG	-	6.22
RREB1	MA0073.1	chr1:182896709-182896729	GGGTGTGGGGTGTGGGGTGG	-	6.41
ZNF263	MA0528.1	chr1:182898113-182898134	CTTTTCCTTCCCCTCTCCTCC	-	6.33
ZNF263	MA0528.1	chr1:182898116-182898137	TTCCTTCCCCTCTCCTCCCTC	-	6.35
ZNF263	MA0528.1	chr1:182898120-182898141	TTCCCCTCTCCTCCCTCCATC	-	7.21

Enhancer Sequence

AGTAAGTATT GACTCGGCTG CCATCCAGTG CATGGGACTG AAGAGCTCTG GGTGTGGGGT 60
GTGGGGTGGG GGATGGGGGT TGTGGGTGGG GAGTAAGGGG AGTGAGGGAG GCTGTGGCAG 120
CAGCTAGCTA GCGCTGCAGT GTGGTTATTC CCCATTCCCC TTCAGGACAG GCATCCTCCC 180
CTGGGAATAC CAGGCCTTGC ACTCACACCA GCCCCTCCCA CATTCCTGGA GCATGTTGTG 240
GGAGCTGACC TACTTTGTGT CTACTTGCAG AAATGTGGTT GTCTTTTAGC CCAAGACTCT 300
ATTAGTGGCC CCCACTTTTC TTGTTTAAGA CTTACTTACA GACCACAGAG CCGTTGGGGA 360
AGGTACTTCT GGGAGGTAGT GGTGCCCCAG TCACAGAGGG ATAATAATTA AATGTAGTGT 420
CAGTGTAGCC CGTGGGTGGT TTTTGTCAGG AGAATGGAGT TCAGTTTAGG GCTGGTGTGT 480
GTCCTTGTTA GTACTCAAAG CCTATGACAC TTCCCTCATA GTGACAGCTG TGATTTAAAA 540
TGGCTCCATG CGAAATGTTT ATGCGTCCTT TACCCTATGA AGCTATGAGG GTGTGTGGGT 600
AAGGAGATGG ATCTGTGTCA AGTGCTTGCT ATGTGGTCTA GACAAGAGAA GAGAGACAGA 660
GACAGACAGA GAGAGCTGTG GGACAGATGT TATTCCTGTC TCCATTTTAC AGATAATGGG 720
GTGTAGAAAT ATTGAGGTTG TCACCCAAGG TTCTCCAACT AGTTATTCAG CCCATTTCAC 780
TATACTCGAG GGCTTTCAAC AGCCCCAAAG GCCCCAGATT GGCTGGGAAT GATCACGGAG 840
GAGGCTGGCC TATAAAGATG GAGCAGTTGC TTCTTGCTGA CTTGGCTGGT GAATCAGGAA 900
CAAGTAGCTA CAGGTAGACG TACACCTACC TAACTCACCC TTTCCTGGGT AGACACGGCT 960
TCTGGCTGCC ACATCCAATG GCCTGCTCCT CTCTGTGACT CCTCAGCCAC ACCTGACATA 1020
CCGGCCGAGG CTCTTCCCAG ACACAGTGTT TTCATTTGGC ACCGAGCTCT GCCCTTGCCA 1080
TCCCTGCCTA CAGCATCTCC TTTGCAACCT TCTTGGGACT TCCTGCAAAG CTACCTGAGG 1140
GAGGGCTCTA TCCTCGCCCC TCCTCCTTTG GACTCATGGC TTCATTGCTA TTTGGCTACT 1200
GCATTAAAAT ATGTACACAA AGGGGCGAGG GGTATGCAGT GCTGGGCTTC ATCTTCAGTG 1260
CCAAGGAGTT AAAGAAAACA ACCCACAGTA TCCATATTAC CACTTTAGAG TCTTCTGTCT 1320
CCTGCCTCAG CTTCAGGTGG AGCCCCTGCT GTGCACTGTG GACTTTACCG GCCCCAACCC 1380
AGATCTGATA TGTCCCAGTT CTCCTCATAG CTCTCTCAAT TTGGCCCCCC AAAAGCCTTG 1440
GAGCGCACCC TGTCTTTTCC TTCCCCTCTC CTCCCTCCAT CCAGTCTATC AGCACACTCC 1500
CCCAGTTCTA TCTCCGAGAA AAATAGAGAA TCAGACCCTG CCTCCTCATC TCCACCAGTA 1560
CCACCCTCAT CCCGCACACC CTACAGTTGC GACCGTGTCC GCTGTATCTT TCAGCCTCCT 1620
GTTCTGCCTC CCCTTTGCCC GCTGCTTTCC AGGGCCCCCT GCCCTCCTAC TGTTGCTTGG 1680
CACTGCCAGG CTCACAGCTC TTCATCAATG TCATTATCTG TAGTCCCTTG GTGTCCAGGT 1740
GATCTGCTTG CTCAGTGACC TTTTGATACA CCTTCTAAGC TCAGTGACAT TGTCCTCCCC 1800
CCCTCCCCAC CCCAGCTGGA CAGCTCCTGG AACACTGCCT GCCATACTGT GTATGCCATA 1860
TCTGATTGTG TCCCCAGAGA GTGTGCAAAT GCAAAGAGCA AAGAGAACAG AGTCTGAGGC 1920
CTGGTTTTCT ATTTTATTTT ATTATTTTGA GAAACGATTC TGCTATGTAG CCTAGAAGGG 1980
CCTAGAATCA TGATTTTCCT GCCTCTGTTG CCTCAATGCT GGGATCACAC GTATTATGGC 2040
TTTCAGCACA GTAACTGACA CTCGGACGGT CTCCACAGAT GTGTGCTGAA TGAGGGATAT 2100
GGCAAGAGCC CTCCCAGAGG TGCCCTCCCA GAGGTGCCCT CCCCCACTCC AGTTATTTTT 2160
CCAGCTGGAA GGAAGCTCTG GGGCTCCCAG CTAACAGCCC TGTATCTCGT 2210