EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02394

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:182541250-182542550

Target genes

Number: 8
Name	Ensembl ID

Parp1	ENSMUSG00000026496
Lin9	ENSMUSG00000058729
Acbd3	ENSMUSG00000026499
Gm17275	ENSMUSG00000090986
Gm16067	ENSMUSG00000073485
H3f3a	ENSMUSG00000060743
BC031781	ENSMUSG00000038806
Ephx1	ENSMUSG00000038776

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:182542277-182542289	AAACAAATAATC	-	6.07
Foxd3	MA0041.1	chr1:182541644-182541656	GTTTGTTTGTTT	+	6.32
Foxd3	MA0041.1	chr1:182541648-182541660	GTTTGTTTGTTT	+	6.32
Foxj3	MA0851.1	chr1:182541650-182541667	TTGTTTGTTTATTTGTT	-	6.12

Enhancer Sequence

AACCGGCTCC TCAGTAATCC CTGGGGAGGT TGAGGCAGAA AGGGTATGTA TGCATTCTAA 60
GCTAGCCTAG GTTATAGATC TGTGAGGAAA AATGTTAATA TACATGCACA CACAGAAAAC 120
TTCAAAATGG CTGGGCGTGG CGGCGCACGC CTTTAAAATA CACTCGGGAG GCACTCGGGC 180
GGCAGAGGCA GGCAGATTTC TGAGTTCGAG GCCAGCCTGG TCTACAAAGT GAGTTCCAGG 240
ACAGCCAGGG CTACACAGAG AAACCCTGTC TCGAAAAATA AAAAAATAAA TAAATAAATA 300
AATAAAAAAA GAAGAAGAAA AGAAGAGAAA AGAAAACCTC AAAATGTAAA GCCAGAATCT 360
CATCTCTGTG AGATTTTTTA AAAAAGAATT ACTCGTTTGT TTGTTTGTTT ATTTGTTTGT 420
TTTAGAGACA AGGTTTCTCT CTGTGTGTAG CCCTCTGTAG ACCAGGTTGG CTTCAACTCA 480
GAGAGATCCA CCTGCCTCCG ACCCCCTGCA TGCTGGGATG CAGGTGTGTG CCACCATGCC 540
TGGTCAGGAA GGCGCTTCTT TAGATGTGGG GATAGGATCC ACAGCCTTGG GGGTGCAAGG 600
CACACACTCC TTCCCTGAGC TCCCCTCCCC ACACCTTCTG AGTAATTCTC ATTCTTTAGG 660
TTTTTGTATT TTTCCACAAC GAGCCTGGAT AAGCTGTTGA TGAAACAATA AATCTCAGTT 720
GTGCAACTGA CAAGTATCCT GTTGTGCTTT CTGTGCCGTT ACTACAGAGA AGCATTGGTC 780
CTGAGTTCCC TAGAATGTGG TGGGAGACGT CTCCTCAGGC AGGTCTGAGC TGAGGAGGCA 840
AGCCTGGTGA GCCGCAGTCA TCCTCAGTAA AACTTGGAGC CTCTATCAAA GGCGTAGGAC 900
TCTGCCTGAG AGGATCCCAC TGTCCTCGGT CTCTAAGGGC ACTGGGCACG CCTTGTTCCT 960
GGTTGTTGGG AGCCGCCCCC ACATTCGCCG TCACAAGATG GCGCTGACAT CCTGTGTTCT 1020
AAGTGGTAAA CAAATAATCT GCGCATGTGC CAAGGGTATT TTATGACTAC TTGTACTCTA 1080
CCTTTCCCGT GAACGTCAGC TCGGCCATGG GCTGCAGCCA ATCAGGGAGT GATGCGTCCT 1140
AAGCGAAGAA TAACTCCTCC TTAAAGGGGA CGGGGTTTTC CGCCATTCTC TTACTCGCTG 1200
GCATCTCTCT GGCTCTGCGC GCCCTGCGCT CTCTCGCTGC CTAAAGATGT AAACAATAGA 1260
GCGCGCTCTG CACTTTGGCG CGCCGGAGCT CTGGCTCCTA 1300