EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02260

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:173434880-173435710

Target genes

Number: 19
Name	Ensembl ID

Sdhc	ENSMUSG00000058076
Tomm40l	ENSMUSG00000005674
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235
U5	ENSMUSG00000065033
Alyref2	ENSMUSG00000060244
Gm9765	ENSMUSG00000038218
Gm15431	ENSMUSG00000059058

TF binding sites/motifs

Number: 2

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

RREB1	MA0073.1	chr1:173435178-173435198	CCCCCAAACAACAACAAAAC	+	6.73
SNAI2	MA0745.2	chr1:173435588-173435598	TGCACCTGTT	-	6.02

Enhancer Sequence

GAAAAAACCT TGCCTTTGAT GCAGCTCAGT GGCAGAATGC CTACTCACCA TGAGCAAGGA 60
AGGCGGTGGG TTTAATTACA TGGAAAGTCT TTTCTGTCTG GTAGGGGTGG TACCTACCTG 120
ACCTCTCAGC GTTGGTAAGG CTGAGACAGG AGTTTTAGTG AGATATGACT AATCTAAAAT 180
AAAATCAAAG GCAGGGGTGG TGGTGGTGGC GGCGGCTCAT GCCTTTAATA CTAGCTTCTA 240
GGATATACAG GCTCCACAGA GAAACCTTGT TTCAAGCCCC TCTCCCCAAA ACCCTGCCCC 300
CCCAAACAAC AACAAAACAA AAAACAAACA CCAACTTTCT TTTTTTTTAA CATAATATTT 360
TTGTGAATTA TTTGGGACTT TCACACTGTG TACCATGATC AAGCTCACTT CCCACTCCTC 420
CCGTTGTATC TTTAATTTTC CAAATCTTAT TATTATTATT TTATTTTATT TTTTTCCGAG 480
ACAGGGTTTC TCTGTGTAGC CCTGGCTGTC CTGGAACTCA CTTTGTAGAC CAGGCTGGCC 540
TCGAACTTAG AAATCTGCCT GCCTCTGCCT CCCAAGTGCT GGGATTAAAG ACGTGCGCCA 600
CCACAGCCCA GCCCAAATCT TATTTTTAAT GATAGTTCTT AAACGCTTTA ACCTCCCTTG 660
TAGCCCACCA CCCACCAAAG TGGTGGGAAA GAGAGGATAC GGGGGAAGTG CACCTGTTTA 720
GAAAGATTCT TTGGAGTAAA CCCCCTCTGT GTTGTTTGGA AATCAGCAAT TCAGTTCACT 780
GGTCATTGAG CAGCACAGTT TGATCTACTT GCAAATACTT CACTGATACA 830