EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02259

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:173382300-173384450

Target genes

Number: 24
Name	Ensembl ID

Fcgr4	ENSMUSG00000059089
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Tomm40l	ENSMUSG00000005674
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Arhgap30	ENSMUSG00000048865
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235
Alyref2	ENSMUSG00000060244
B930036N10Rik	ENSMUSG00000091993
Gm9765	ENSMUSG00000038218
Gm15431	ENSMUSG00000059058

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

SOX10	MA0442.2	chr1:173382666-173382677	TGCTTTGTTTT	-	6.02
SPIC	MA0687.1	chr1:173384377-173384391	GACTTCCTCTTTAT	-	6.27
STAT1	MA0137.3	chr1:173383151-173383162	TTTCCCGGAAA	-	6.32
Stat4	MA0518.1	chr1:173383148-173383162	TCATTTCCCGGAAA	-	7.28

dbSUPER

Number of super-enhancer constituents: 1
ID	Coordinate	Tissue/cell

mSE_01623

chr1:173382646-173401389

Macrophage

Enhancer Sequence

AAACCCACAC ACATGTGCAC ACATAAATAA AAATAAAACC TTACAAACAA AAACAAAACT 60
AGGTTTTAGG AGCTGGGAAG GCAGCTTGGT TAGTTCAGTG CTTGTCTCAC ATGTATGATG 120
GACGCCTTGG ATTCAGTCCG CAGTGATGCA TGAAATTGTG CATGGTGCAG TATTCCTGTA 180
ACCCAGAATT CAGGAGGTGA AGGCAGGAGG TACAGAAATT GGAGGCTAGC CTGCTAGCCT 240
GGGCTATATG AGACCCCATC CCAAACAAAA CAAAAATAAT AATTTTAGTT TTCTTCTCCC 300
GGAAACTAGA ACTTTAAGAA TGTGTTAGTA TTAAAATATT ACAGAGATTG GATTTGGAAA 360
CAAGGTTGCT TTGTTTTGTT TTCCCCTGCA TTTGCTATCT CCCCATCTGT CATTCCCATT 420
TAAAAATTGG ATTTGTTTTT TTAAGATAAA CCTCAACAAT AGATAGTAAA GTGAAAGGTC 480
TGCTAGGACC TAATTTGTTT GTGTTCTGTG CCACTCAGCA AATACGTAGT ATCAGGCACT 540
ATGCTAGCGG TTGAGTAATA TTTAAATTAA CAAACCAGAC GTGGTCTCTG CTGTCTGGGC 600
AATTGCTGGA AAGTCGTGGG AGTGTTTATA TGTAGCACAG AGTTTAGGAC TTTTATTTTC 660
AAGACAGGAC AGCCCTGACT GTCCTGAAAC TCACTCTTTA GATCAGGCTG GCTCTCAGAC 720
TCGGAAATCC ACCTGCCTCT GCCTCCCAAG TGTTAGAACT AAAGGCTTGA GAAGTATTTC 780
AGCGGTGTTT CTGCAGGGGG TAATGAAGGC CTAGGGAAGA GGCTCCGAGA GGACTGGGGT 840
GTGGCCGGTC ATTTCCCGGA AAGAGAAAAA GGGACTGTTG CCAAACAGGT AATGAGGGGA 900
AAGGGTGTTT CCCACAGCAG AGAAAGCTTG AGCAAAGGCA GGGATTGGGA AACAGCTGGG 960
AAGTGGTTTT GTGTTGCAAC AGCAGAGTGG GTGAGAACTT GGGAAGCTTC ACACAACTCA 1020
GATGGGGCGG GGAATTCTCT TGCTAGATAT TTGCATTTTG ACACCTATGC TGCCTAGTGT 1080
CCTCCAACAC TGGCCACAGA GTTGGATCTG CCTTGGGGGG AAGGCTGTGG AGTGTTGAGG 1140
TTGAGTAGCA ACCACCTTGC AGTTGTACTG AGTTGGTTTG AAACTTTGCT ACTGTTCACT 1200
GTTAACTTGG TCTGTGGGTA GAGGTCATTC TTCCATGTTT GCTTGGCTAG GTGTTTTGTT 1260
TTGAGACAGG CTCTTTCTAT GTCTCTGTAG CCCTGGCTGG CTTGGTATTC TGGGGTGTCC 1320
TGGAACTCAC AGAGGTCTTC CTGCATATCT TTTTTTTGTT GTTGTTTTGT TTTGTTTTGT 1380
TTTTTTTTTT TTTGGTTTTT CGAGACAGGG TTTCTCTGTA TAGCCCTGGC TGTCCTGGAA 1440
CTCGCTCTGT AGACCAGGCT GGCCTCGAAC TCAGAAATCC GCCTGCCTCT GCCTCCCAAG 1500
TGCTGGGATC AAAGGCGTGC GCCACCACTG TCCGGCCCTC CTGCCTATCT TAAAGGTTGG 1560
TTAGATTTTT ATTTGGTAGA CTTCTTAATT GCTCTAGGTC TCGCTTTCTC CATGTTGAAA 1620
ATGGCAGTCC TGATACTGTC AGCCATCTCT GAGGGTTGCT GCGGCATTTG AGCGGTTGTG 1680
TCCCTGTGCT TGTGACACTG CCTGCTCCAT TCCAACTGGG ACGGAAGATG GATTTCCAGT 1740
ACAGACTCAC AGCTTGAGGA GGCCGAAAGG CTTGTCTTCA GTTTTGTGGC TTTTTGTGTT 1800
GTGAGTCTTA GTGAAGGAGG TATATGTGGT GCCGTACACC TGCAGCTCAG TATTGGGGAA 1860
GCTGAGGCAG GAGAATTTCA AGTTCAAGGC TGCCTTGATC TACATAGTGA GTCCATGTCT 1920
CTTTCACATA CAAAAATTAA ACATTCAAAG CAAAAAGTAA GAGAAGCTGG AGCTGGAGAG 1980
ATGGCTCTGT GCTTAAGAGT GCTGAGGACT CAGGTTCAAT TCCCAGCATC CATGTGGCAG 2040
CTCACAACTA TCATCATTGC TAGTTCTAGA GGTTTTTGAC TTCCTCTTTA TGACTTCTTT 2100
GAGCATGGCA CACACATGAT GCACAGACAT CTGTGCAGAC AAAACACTCA 2150