EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02249

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:173238900-173240500

Target genes

Number: 22
Name	Ensembl ID

Fcgr4	ENSMUSG00000059089
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235
Alyref2	ENSMUSG00000060244
B930036N10Rik	ENSMUSG00000091993

TF binding sites/motifs

Number: 5

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

HSF1	MA0486.2	chr1:173239115-173239128	TTCGAGAACTTTC	+	6.1
HSF4	MA0771.1	chr1:173239115-173239128	TTCGAGAACTTTC	+	6.09
NFYA	MA0060.3	chr1:173240443-173240454	TCTGATTGGTT	-	6.62
NFYB	MA0502.1	chr1:173240444-173240459	CTGATTGGTTAATAG	-	6.16
ZNF263	MA0528.1	chr1:173240032-173240053	CCTCCATCTCCTTTCTCCTTC	-	6.66

Enhancer Sequence

CAACCACATG GTGGCTCAAA ACCATCTGTA ATGGTATCTG ATGCATTCTT CTGATGTGTG 60
TTTGAGGACA GCTACAGTGT ACTCATATAA ATAATAATAA ATAATATTTA AAGATAACTG 120
AATTAAGTAT CTTTCTTTGA GAAAGGGTTA TTTTCAGGAA TCTTTTTGTT TGTTTTTGTT 180
TTTTGAGTCT GGGTTTCCCT GTGTAGCCCT AGCTGTTCGA GAACTTTCCC TTTAGATCTG 240
GCTAGCCTCC AACTCAGAGA TCTGCCTGCC TCTGCCTCCC AAGTGCTGAG ATTACCCCAG 300
TTTATTTCCA GAAATCTTAT ATGTGACGTG AGTGATCTTT ATAGACCACA CAGAAATCAC 360
ATGTGAAATT CATTAAATAA AAATTTATGG ACTTAAAACA AAAATTGCTT TTAGGTTGTT 420
CCAATTTTCT GTTTTATTTT TTTCTCTTTT TACTACTTTG TTTGTGGGTT CTTCTCCTAA 480
CAATATCTTC TCTGGCTCAG GACAGCTTTT CCAGGCTAAA CTGTTCACCA ATTGTCTTCT 540
TTTCTAACTC TACTTTCTGA TCCTACTCTT CTGTTTCCTG GAACCTCCCC ATTCCTACTC 600
TTGAATGGTA CTCCCTCTTT GCCAGCTTCT GAGGTCTTTT TATATTCTTT CCTGTTCCCA 660
GAATTCCTAG AGGCAACAGG CATTAAAGGA CATAGTGTCC TTTAAAGAGC CAGACGCATA 720
AATCATACTA CTTTTTCTTT CATTCATTTT GTATAAACCA TTTAAAGTGG CCATTCTGAA 780
TGCCAAGGTT ATTGTGAAAT AGTTACATCA GCTCCTGTAT CCACCAAACC TATTTCAATG 840
TCATTCACTT GCAACTTTAA TTTTGGCCTC TGATACATAA CAACACGTTT TCCAGTTCTT 900
TCAAATCTCC TTCTGTTCCT TTTTACTGGA GCAGTATGAA ATGAATTATA AATTCTTGCT 960
ATCTCGCATA GAAGACACCC AGTCTTGGTA TTTTATTTAC AAGCTGTAAG CCTAGATTGG 1020
GCAGGTTTTG GAGCTGTTCT AACTTATATC CCAGGCATAT GACCCTTGTT ACTTGCTGTT 1080
CCTCCTGGCC ACCTGCTCAT GATCTATCTC CTCTCATGAC AGCCTTCTCC TCCCTCCATC 1140
TCCTTTCTCC TTCTCATCTG GTCAGAGACC CCCTCACTCA ATCCTCAAGT CCTGTCTTTC 1200
TCTCCCTATT GCCCAATTAT AGGCTCTTAC CTTTAATTAA TCAGTTAATT TAAATTGGGG 1260
AGCAGGGTTT ACATAGCATC ACTTGGTATA TGTGAAGATC TCCTCCTCAG GGGCAACCAG 1320
ATCTTGGGGT ACAAAATTTA GCATATGAAT ATGTAGCAGC GCCAGAACCC TCCCCCCCCC 1380
CCCAAGAGCA GCTTTGCCGT TGATATGCTG GGGGAATGGT TCTGTGCACT GTGCATTCAG 1440
ATGATGAGTA CTGTGCCCAG AGATCTGGTT TTCGTCTGGA CATTGGTATT GTCAAGCATC 1500
TCCTGTCTCG ATGCTGTGCG GGGGAAAATT GTTTTCAGTC ATCTCTGATT GGTTAATAGA 1560
GAGCTGATCA GCCAATAGCT GATTCTGATC CCAGTGAAAG 1600