EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-02236

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:173190050-173190450

Target genes

Number: 25
Name	Ensembl ID

Fcrlb	ENSMUSG00000070524
Fcgr2b	ENSMUSG00000026656
Fcgr4	ENSMUSG00000059089
1700009P17Rik	ENSMUSG00000026649
Sdhc	ENSMUSG00000058076
Mpz	ENSMUSG00000056569
Nr1i3	ENSMUSG00000005677
Tomm40l	ENSMUSG00000005674
Fcer1g	ENSMUSG00000058715
Ndufs2	ENSMUSG00000013593
Adamts4	ENSMUSG00000006403
B4galt3	ENSMUSG00000052423
Ppox	ENSMUSG00000062729
Usp21	ENSMUSG00000053483
Ufc1	ENSMUSG00000062963
Rpl27	ENSMUSG00000079137
Dedd	ENSMUSG00000013973
Nit1	ENSMUSG00000013997
Pfdn2	ENSMUSG00000006412
Usf1	ENSMUSG00000026641
Tstd1	ENSMUSG00000091166
F11r	ENSMUSG00000038235
Alyref2	ENSMUSG00000060244
B930036N10Rik	ENSMUSG00000091993
Gm9765	ENSMUSG00000038218

TF binding sites/motifs

Number: 3

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ATF4	MA0833.1	chr1:173190416-173190429	GGATGATGTAATA	+	6.07
JUN	MA0488.1	chr1:173190415-173190428	GGGATGATGTAAT	+	6.11
JUND(var.2)	MA0492.1	chr1:173190414-173190429	AGGGATGATGTAATA	+	6.07

Enhancer Sequence

CTCACTCAGT AGGTGCTCAA GGAATGGCAG CTGCTGCTCC TGTGGTCCTT GTTCTCCCAG 60
TCACCCTCCA CAGAGGCTCT GCCAGGCACT CGAAGTCCAC AAGGATTCAT GTCACTTGTG 120
CCTATCTTTA GTCCCAGGCT CAGGACCTTC GGTTGGCAGG ACCCTGTTTA GGATTTGGAG 180
AGAGTTCAGA CTCTCAGATG GCCATCTTGT CTATTACTTC TGTAGGCACG TAAGCACCTG 240
CAGCAGACAT AATAAACACT TGGCAAAGAT AGTCAACAAG AACATGAAGG TACAAGAACA 300
GAACCCAACA ACTCCCTGGA CACAAACAGG AGCTTAGTTG TAAGAATGGC GGAAGGGGCA 360
GAGAAGGGAT GATGTAATAG CATCCTGGCA TTCCAGGAGC 400