EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-01633

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:137525920-137529180

Target genes

Number: 10
Name	Ensembl ID

Rnpep	ENSMUSG00000041926
Timm17a	ENSMUSG00000062580
Shisa4	ENSMUSG00000041889
Ipo9	ENSMUSG00000041879
Nav1	ENSMUSG00000009418
Csrp1	ENSMUSG00000026421
Phlda3	ENSMUSG00000041801
Tnni1	ENSMUSG00000026418
Tnnt2	ENSMUSG00000026414
Pkp1	ENSMUSG00000026413

TF binding sites/motifs

Number: 14

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

Foxd3	MA0041.1	chr1:137526143-137526155	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:137526147-137526159	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:137526151-137526163	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:137526155-137526167	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:137526159-137526171	AAACAAACAAAC	-	6.32
MSC	MA0665.1	chr1:137528194-137528204	AACAGCTGTT	+	6.02
MSC	MA0665.1	chr1:137528194-137528204	AACAGCTGTT	-	6.02
MYC	MA0147.3	chr1:137528294-137528306	GCCCACGTGCTC	+	6.27
MYF6	MA0667.1	chr1:137528194-137528204	AACAGCTGTT	+	6.02
MYF6	MA0667.1	chr1:137528194-137528204	AACAGCTGTT	-	6.02
SPIC	MA0687.1	chr1:137528229-137528243	CTAAACAGGAAGTA	+	6.08
Tcf21	MA0832.1	chr1:137528192-137528206	GCAACAGCTGTTAA	-	6.44
Tcf21	MA0832.1	chr1:137528192-137528206	GCAACAGCTGTTAA	+	7.06
ZNF740	MA0753.2	chr1:137528079-137528092	CCCCCCCCCCCAC	+	6.92

Enhancer Sequence

CACGCCATTA ATCCCAGCAC TCGGGAGGCA GAGTCAGGCA GATTTCTGAG TTCGAGGCCA 60
GCCTGGTCTA CAGAGTGAGT TCCAGGACAG CCAGGACTAC ACAGAGAAAC TCTGTCTCAA 120
AAAACTCCAA TAAAAATAAA AATAAGGGGT TGGGGATTTA GCTCAGTGGT AGAGCAGTTG 180
TCTAGCAAGC GCAAGGCCCT GGGTTCGGTC CTCAGCTCTG GAAAAACAAA CAAACAAACA 240
AACAAACAAA CAAATAAAAT AAAGACTGTA GTCCACCTTG CCATGTTTCA GAGAAAAGGC 300
AGAAGACATT TGTTTTACTG TCCATTCTAG GTTTGGAACC CAAGGAAGGA GAAATTAAGT 360
CTCAGAGAAG GTGAGCCCTG CAGGAGATTC ACTGGCTGCC TCCACCTGGA GACTCTTTCT 420
ATGGAAACCT TCCTCTACCC CAGCCTGGGT GCCTTCCTGT CCAAGGGTCA TTCCAAGTGC 480
AAAGGCTTTG AGAGAGAACT GCCCCAGAAC CCTAATAAAT AAGGGGAACC CAGAAGAGCT 540
GACTGCTTAG GACCCTTCCC CTAAGGGCTG CTCATCTGCT CTGAGCTGCT CCTTTGGATC 600
GAAGCCCAGA ACATGGCCTG TAACTTTAAG ACTCAGCCCC TGTTTTGAGC ACACAGCAAG 660
CACCTCATAA CAAACAGCTG GAAAGAGAAG TTGAGACACT GCATCTCAGC AGAATTGTTT 720
CCAAATAAAG TGTTGTTTCT CTCCCTCCTC AGACTAGCCC TGGTGATGCA CCCAGCGCTT 780
AAGCACTGCG GATCTTTTCT TGCTTATGAC ACAGACACTC TCCCCTCCCC GCTCCACACC 840
CTCGGGCCCC ATCCCCAGCA TGGCCTCTTT TATAGCAAGG ATAAGAATGG TGCTAACAGG 900
AATCTGAGTG TTCTCAGGAA GCCTTCCTGC AGCTCCCCCC ATAAAAAGAC CCCTGGTAAA 960
GGCTTATCTT TCTAGAGAGG TAAGATTCAT AGAAAGATAC TTCCAGAACA TCAACATCAG 1020
GGGATGGGGG TGGGGATCCT GTGTCTGAGA TCCCAGACCT CTGTACTAGG GTCAGGACCT 1080
CATGAAACTC TCAACACATT AGTTTTGTGC TCTGTAGTTT ACGAGGGTCA CAGAAAACTG 1140
AATTGTATCC AGAGCAGGAG GGCTGGCCCG GTAGAGGTTA ATGGACTGGG GTGGCATATC 1200
CGCCATGAAT CGAGGGATGC TGGCTAATGG GCTTTGCAGA TATAAAACCT TTGTCTTCCA 1260
TTTTCACTAA GATAGGGTCT TGAAGTCCCT TTCCAACCAT AAAAATTAGA ACCAGAGAAG 1320
AAAATGACCA GGGTGGCAGC CGGGAGATCC TGAACATGTG CCCCATGAAG CGTGTGGCAT 1380
TACCTTCTCA GAGAGCTCTC TGATATGATT TCTCTTTCCT AGGAGATCCA TCCTTGCCAG 1440
CGGGGCCTAG GTGAGGAGAC TGGGAAAGTC AGTGACCCCC AACACCCAGA TACCTGGTTT 1500
GACTCCTCCT TATGTTAAGT GGGACCAATC CAGTCCAGGC CCCAGGAAAA GCTCCAGAAA 1560
TGTTTGTGTT GTTTTCCGTT TCTTGAGACA GGCTCTCAGT ATGTCCTCCA GGATGGCCTT 1620
TAACTTGGGG TCCCCTGGGA TTACAAGCAT GTACACCACG CAGGGCTGGA AGTGGTTTCT 1680
GAGTGAAGGG CAGAGCCCCC TAATCCTAAT ACCTCCCTGA TATTAGCCAC CTGTCCAAGG 1740
CAAGGGCAAG GATAGGATGA CCCTTGTAGA ACCCATTCAG CTCCAAGACT AACCATAGAA 1800
GGAAGAGCAG CCTCCTCTCT CCATCCCCCA GTCCCTGGAC TGAAGACTCT GCTGCCTGGG 1860
TACCACTAGG ATTTCCCATC CAAAAAAAAA AAAAAAAGAT TTCCCATCTG AGAAGATCTC 1920
CCTGACCTTC TCTGAGGAGA AGAGAGGCCC TGAGCTCCGT CTCCATGCCA CGTACACAAC 1980
AATGCTCTTC ACTCCTGATC TATCCTGGAC ATCTCTAGCA ATGATGCCTT CTTGAGGAAG 2040
TTAGTCTGCT GCCAAGTACT GTGTCTGGAT CAGACTAGAC AATCAATATG CTGGTCTGCT 2100
TCTTGGTCCC TGAAGCTGGG CTCCTCTCCT CTGTCCCTTA CAGAGGCAGG ATGGTCAACC 2160
CCCCCCCCCC ACTCTTGTTC TCTGCGGGCC CCGGAATGAA GGCTCCTGGG AAGGATTGGC 2220
CTCACTTCAT CTCACTGAGC TGCTAGCTCA CCAGTCTAAA TGAAGAACAT GAGCAACAGC 2280
TGTTAAGGAA GCTGACCTGG ACTTCTGGGC TAAACAGGAA GTAGGGTGGA GGGCAGGGGC 2340
GGAGCTTCCT GAGGAGTAGG AAGGAGGAAA TCTGGCCCAC GTGCTCCCTG TGTTATCGTA 2400
GCTTGGCACT CAGCCCAGCA GAGCAGAGGC TGCAGCCTGC AGGAAGGTGT CTGTAGATCC 2460
AGTCTTCAAA CATTAGCTGG AAGCCCTCCG GGGCATGTTA GGATGTTATC TGATCATCTG 2520
TGGTTTGCAC TACGAGCGCT GCTCACTCAG AAAGTCTCAA CTCCAATCAA CACAGAGCCC 2580
CCAGAAAGAT GGTAAGATTG GAAGTGGGAG ATATGCGGTA AAGACAGGTA TGTGTGAATC 2640
CCAGGAAACG CTGGGTGCTT TGAGAAGGTA GAGGCTGGGA AGCAAGAGGA GGCTGCAGAA 2700
AACCCAGAAC ACTCTAAACT GCTGTCCTAG GGTTTCTATT GCTGTGAAGA GACACCACGG 2760
CCACCACAAC TGTTATAAGA GGAAACATTT ATCTGGGGCT GGCTTACAGT CCAGAGGTTT 2820
AGTCCATTAT CATCATGGTG GGAAGCATGG TGGCATACAG GCTGACATGC ATGCAAAAAT 2880
TACAGGAATT CTACATTTGG ATCCTCAGGC ATCAGGAGAG ACAATGACAC ACTGGCCAGG 2940
CTAGAGCATC AGAGACCCCA GAGCCCATTC CCAGTGACAC ACTTTCTCTG ACAAGGCCAT 3000
ACCCACTCCA GCAAGGCCAC ACCTCCCAAT AGTGCCACTC CCTATGAGCC TATGGAGCCA 3060
TTTTCATGCA AACTACCCCA CTTGCCCATA GGCGTGCTTC ATAGTTGTTG GCTCTGATTA 3120
CAAGGTCACT TCTGCAGCCC TTGGGCTAAA CCAGAGTTCC TTCTGTGTGT TGTTAAAACT 3180
CATCCTACCT GTTCAGTCTC TTCCCACAGG GCTGTAAGTT CAATGGGGGC ATTCTAGAAG 3240
CCCATCACTA CCTCCCACAA 3260