EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-00784

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:72460300-72462120

Target genes

Number: 7
Name	Ensembl ID

U2	ENSMUSG00000075752
D230017M19Rik	ENSMUSG00000085769
Pecr	ENSMUSG00000026189
Tmem169	ENSMUSG00000026188
Xrcc5	ENSMUSG00000026187
Gm15843	ENSMUSG00000085812
Smarcal1	ENSMUSG00000039354

TF binding sites/motifs

Number: 4

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

NR2F1	MA0017.2	chr1:72462107-72462120	CTCGTGACCTTTG	-	6.67
RARA(var.2)	MA0730.1	chr1:72461335-72461352	TGTCCTCCACATGACCT	-	6.33
Rarb(var.2)	MA0858.1	chr1:72461335-72461352	TGTCCTCCACATGACCT	-	6.01
Spz1	MA0111.1	chr1:72461092-72461103	GCTGTAACCCT	-	6.14

Enhancer Sequence

GAGAAAAGAA ACACCCATTG ACTGGAAGAC TCAGACGAAG ACAAACTGAA CAAGGCTATA 60
GATTAAGTGC CAGAGAATGT TGAAAGAATG TTTCAGGAAG CAACTAGAAC TGGATTTCAG 120
TAGAAGGGAA TGCTGTTAAG TTGGGAAGAA AAGATGGACC CTTTGGTTGG GATAGGCGCT 180
TGGTGTCTGA GCATGGTCTG AGCAGGTGGC TCAACTAATT GTCCTTTGTG GTGGCCAAAC 240
AGGGAAGCAA TCACATCAGA CAGTGCCTGG ATGTCAACCA TCCTTGAACT TGTTCTTTAG 300
ACTTGGTCCC ATGCAAGACG GTAGCATGCT ATCCCCCATT CAATCGTGGC TGTAATTGGT 360
GGTCTTGCAA TTTTGCTTAT TCAACGCGGT GGTTTTCACT GAAACTGTAT TTACTATTTG 420
TTCTCAGGGC TCCCAGTGCA GTGTTTTCCC AGGGTGCAGG GGCTCAGCTG TGGGAACTAG 480
GTTTTCTTGG CTCCCTGTAA ACTCCACCTG CTGAGAGATC CAGTTGTCTC TCTGCCAGAG 540
TGATGAACAT GGTGCAAAGC AGGAAAGTGG GACAAGAAGA GAATGAATTG AAAGTAAAGG 600
AAATAAAACA ACCGCTGAAA ACCCGACATC CAAGACGACA TCACCAATGA AAGTCAATGA 660
GGCAAACACC ATCTGGCCCT GAAATATGAA CGAGCACAAA AGGGCGGCTA CAGCTCCTGG 720
GAATCTGTGC TCCAACCGAG CACACGCTTG CTTTCCTAGC TGCCCGAGAC TCATCCTGGA 780
TGGGGGCTGG TGGCTGTAAC CCTTCTGCAG AGCTCTCCAC GAGCGAGGTG AAGCTGGTTT 840
TCATATTTCT ACTTGTACTT GCTCATTCAT TCCCCATATG CCATCCTTTC ATTAATCCTC 900
TCTTCCTTCT CTTTCCCATC ATGGCCTTAC CTCGCTCCTG AATATTTGCT AAGACTTCCT 960
AGTCAGCTCG CCTGCCTGCT GTGAGCTTTG CTTGCCAGGG CCTCTTTCCA CAGTTAAATC 1020
TGCCCTGACA CTCCCTGTCC TCCACATGAC CTATGTCTCC CATTGCCTGC AAGCAGTACC 1080
CACTCTAATC ATGCTGCTGC CTGCCAGCCA CTTCCGTCCA CACCCTGACC TGACCTTCCT 1140
TCCACGCTTG TTAAGTGATT TGCAGGCCCA TGAATGAGCC ACATTGTTTT ATGAATCTGT 1200
GTTTTTTTGC TGAGGGTTCC TCATCCTCGG ATGGTTTTCC TTTTGTCTCC TTTCACAGTA 1260
CCTTACATAC ATGTTTAGCG ATGCTTTAGT CAGAGGCAAG CATGGTGGCA ATTTAGTGCA 1320
TGTCCCTGAA GCCTGGTGCT GATGAGAGCA CTCACTGGCA ATGCCCCCGG CTACAACCTT 1380
TCTGCCTTTG TTTATGCCCA TAATGCCCAT AGACCAATGA CTGAGCACAG CTGCGTATTA 1440
AAGCAACCTC ACCTAATGGA CAGCATTAGT TCCAGGACAC CCCAAAACTC TTTTGGAAAT 1500
GCTCTAGTGT CTAAGATTTT CCTACTCATT TTCCATACGT CAGTCTGCAT TGAAGCATGA 1560
AGACTCTTTC TTCCTGCCTT TCCTGTTCCC ATCTCACCAG AGAAACTCCT GTCTAACCCT 1620
CTGTGTAGCT CATTTTCTGT TTTTATAACA GATTATCACA GACTGGTTAA TTTATAGAGA 1680
AAATGAATTT ATGTGTCCTT CAAAAGAGAA TTCATTTCTG CTGTAATGAC AATGCCTTCG 1740
GATCTGAGGG GAGGTCTTAG GCCCCGTCCA TCATCCAATA TCGCTGCCCT TGGAGTTCAG 1800
TTTCCAACTC GTGACCTTTG 1820