EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

MM002-00518

Organism

Mus musculus

Tissue/cell

3T3-L1

Coordinate

chr1:54671100-54673300

Target genes

Number: 7
Name	Ensembl ID

Gtf3c3	ENSMUSG00000041303
Pgap1	ENSMUSG00000073678
Ankrd44	ENSMUSG00000052331
Sf3b1	ENSMUSG00000025982
Coq10b	ENSMUSG00000025981
Hspe1	ENSMUSG00000073676
Hspd1	ENSMUSG00000025980

TF binding sites/motifs

Number: 7

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

EBF1	MA0154.3	chr1:54671994-54672008	TTTCCCATGGGAAT	+	6.07
EBF1	MA0154.3	chr1:54671994-54672008	TTTCCCATGGGAAT	-	6.53
Foxd3	MA0041.1	chr1:54672562-54672574	AAACAAACAAAC	-	6.32
Foxd3	MA0041.1	chr1:54672566-54672578	AAACAAACAAAC	-	6.32
STAT1	MA0137.3	chr1:54671927-54671938	TTTCCAGGAAA	+	6.62
Stat4	MA0518.1	chr1:54671927-54671941	TTTCCAGGAAAATG	+	6
Stat6	MA0520.1	chr1:54672012-54672027	TGTTCTGTGGAAATG	-	6.05

Enhancer Sequence

AAAAATATTG TCAGGCTGGA GAGATGGATT AAGTAAGTGA GTAAGTGTGA GAGATGGAAC 60
ACAGACTCCC AGGACCTGTG TAGACTCAAT GCAGGCAGGT GTGGGTGCAC ACGTGCAAGC 120
TCAGCTTGTC TACAGCAAGA GAGGAGATGG AGACAGAAGA ATTTCAGAAG TGGGGGGGCC 180
AACTAGCCTG GTGTCTGCAG ACATGAACAA CAAAAGCCTC CAACCTCATA CAAGGTGGAA 240
GGCAAGGACT AATACCCGAG CTCGTCCTCT GACCTCCACA CACACTGTGT CAAATGAGTG 300
CTTATACTCA CACACACACT CACACTCACA CACGTCTCCA TTAGGCTTCT ACTGCAATAA 360
TAAAGACTGT GACCAAAAAC AAATGTGGAG GAAAGGTTAT TTCAGCTTAC ACAGCCTGGT 420
CACAATCCAT CATGAAAGGA AGCCAGGACA GGAACTTAAG GCAGGAACTT AAGGCAGGAC 480
CCGGGAAGCA GGATCTGAAG CAGAGACCAC TGGAAAGAAA GTTCTGCTCC CTGGCATGCT 540
CCCCACATCT CGCTCACTAA GCCTTCTTGT ACACCTTAGG GCCACTTGTC TAGGGTTGGC 600
ACCACTCATA ACGGGCTGGG CCCTCCCATA TCAATCAGTA ATTAAGGAAA TGCCCTACAG 660
TGTTGCCTAC AAACCAGTCT TAAGGAGGCG TTTTCTCCTT GTGTCTCTCT TCTCTGATAA 720
CTCTAGCTCC TGTCCAGTTA ACAAACAAAC AACAATCAGC ACATAAGCAT TTTAAAAAGA 780
TAGAAATAAT GTTAGTTGTT TTCCCTCTAG TGAGAGTCCT TTGTTCCTTT CCAGGAAAAT 840
GCCTGGCAGC TATCACTGTT TGCGTAAGTA TCATCATTCA TCCCACGGTT GTGTTTTCCC 900
ATGGGAATAG TGTGTTCTGT GGAAATGCAG CCAATTCAGC TAGCTGCTCC TGGAATTGGA 960
GTCCAAACAC CCGTACCCTG GCCGGCCATG GCCTAAGCAC TCTCTGTGTG CTTTGATTTC 1020
CTCAAGGACT GACATTTCAT GAAGTCGATG ATTTTTCTTC CAGTTTGTTT GTTAGCAGCA 1080
AGCCTGACCG GGTAGATTAT GATGACAGCG AGCACAGTTC CAGTACCTTC GCTGACCTTG 1140
AGCAGTTTAT ATGGCAGTTT ATATGCTATG ATGCTGGGTT TGGCACCTTC AGTGAGGAAG 1200
GTGCTAGTCT TAGAATTATC ATGAAAATGC CCCCCCCCTC CTCTGAAGGG TCTGTGGGAT 1260
ATCAGAGGTC AATGGTTGAC ACCATGGAAA AGCTGCTATA TGTAAAGTGT GGGGGTTGGG 1320
AGGAACAAAC CGAGAGGGGC AAAAACATAT TTTGGATTTG ATTTCATCAT ATTTTGAAGG 1380
AGACTCTGGA CTATACAGAA GTAAAGAACC ACACTTTGCA AACAAATCCT ACAGAAAATG 1440
ACAAGGAAAA AAATAAAAAG GAAAACAAAC AAACAAACAA AAACAAAACC AAAACCCAGG 1500
AAGGGGAATC TGGGCCTTTT TCAAATATTG GCAGTGCTCG TCAAAATTCA AACTGTTTGC 1560
TGATCCCATG TCGTGAGAGG AAAATGAAGT CTAGGTCACC GTAGCAATTA AAGTGGAGGT 1620
GCAAATAATA TTCCCTGAAA CACGACTGTT ATTATTCACC TAAGAGCAAC TGAATGGTGT 1680
AAATGATATG ACATTATGAA AGCTATTTCT TCTTTTAAAG GTATATTTTT TATTTTATGT 1740
GTATTTATGA GTGCCTGCAT GTATGTCTGT GTACCACAGA CATACCTAAT GACAAAGGAA 1800
AGTGGAGAAG CAGTCAGATT CCCTGAACTG GAGTTACAGG CAACTGTGAG CTGCCATCTG 1860
GGTTTGGGTC CTCTGCAAAA GCAACAAGTG CTCTCCACCA CTGAACCATC TCTCTAGCCC 1920
CTTGCATGCT ATTACCAGCA AAAGAAACTG AAATATGAAG TAAGAAAGAT TACTGCCAGA 1980
TATGATGGCA CGCATCGGGA ATGCTAACAC TCAGGAAGCT GAGTCAGGGG AGTCATAAAT 2040
TCAAGCCCAT CCTGGACTAC ACCGTGAGTT CCAGGTCCGC CTGGGGTCCA TAGTGAAACT 2100
CTATCTCAGA ACCAAAAGAA AACCAACCTT TTTCTTAAAA TTAAACTTTA TAAGTTGTTA 2160
ATTTTGTAGG ATTCCCTCGA AAAGTGTGGT ACTTTATTTT 2200