EnhancerAtlas 2.0: an updated resource with typical enhancer annotation in 600 tissue/cell types across nine species

EnhancerAtlas 2.0

Tag

Content

EnhancerAtlas ID

HS197-22603

Organism

Homo sapiens

Tissue/cell

ZR75-30

Coordinate

chrX:71488860-71492450

Target genes

Number: 6
Name	Ensembl ID

RP11	ENSG00000225471
PIN4	ENSG00000102309
ERCC6L	ENSG00000186871
RPS4X	ENSG00000198034
HDAC8	ENSG00000147099
RP1	ENSG00000225858

TF binding sites/motifs

Number: 9

JASPAR ID

Coordinate

Motif Sequence

Strand

-Log10(p-value)

ESX1	MA0644.1	chrX:71489993-71490003	ACCAATTAAC	+	6.02
LMX1B	MA0703.2	chrX:71490840-71490851	TTAATTAAATT	-	6.32
Lhx3	MA0135.1	chrX:71490837-71490850	AAATTAATTAAAT	+	6.07
NKX2-5	MA0063.2	chrX:71489671-71489681	ACCACTTGAG	+	6.02
NKX2-5	MA0063.2	chrX:71490773-71490783	ACCACTTGAG	+	6.02
PHOX2A	MA0713.1	chrX:71490841-71490852	TAATTAAATTA	-	6.62
PROP1	MA0715.1	chrX:71490841-71490852	TAATTAAATTA	+	6.32
PROP1	MA0715.1	chrX:71490841-71490852	TAATTAAATTA	-	6.62
Phox2b	MA0681.1	chrX:71490841-71490852	TAATTAAATTA	-	6.62

GeneHancer

Number: 2
ID	Chromosome	Start	End

GH0XI072267	chrX	71487826	71490832
GH0XI072272	chrX	71491081	71491230

Enhancer Sequence

TGTAAACTAT CAAGTACTAT ATATGTCCTA GCTATTTGTT ATTCTTCTTA TTCAAAGCTG 60
TGCTGCATTG TGCTGCTCTG ACTCAGATGT GAGGCCTAGC CTGCTGGAGG CACAGGGATG 120
TAAACTAAAC CCGGTGAATT TCTGCTAGCT TCAGTCTGTT TCATCTCAGG ACTTCTGTTT 180
GGCTCCCTGC TGAGATGATC TCAAAGGTTT CCTTCAGCTC TAAGAATATG AAGCAAATTG 240
GAAGGCTTAA AAAGCCTTAC AAAGACACAA GCTATTTTAT TTGGAAATTT GCAGCTCATT 300
TAGATGATTC AGGGCCCTTG CGCTAAGTCC ACTTGCCTGG TATTAGAATG GAAATCTTCC 360
CCACTATGGG AAGTTGCTAG TAAAAAAAAA ATTCCCGGCC GAGTGCCGTG CTCATGCCTG 420
TAATCCCAGC ACTTTGGAAG GCCAAGGTGG GCAGATCACC TGAGGCTGGG TATTCAAGAC 480
CAGCTGGACC AACATGGAGA AACCCCATCT CTACTAAAAA CACAAAATTA GCCAGGCGTG 540
GTGGCACATG CCTGTAATCC CAGCTACTCA GGAGGCTGAG ACAGGAGAAA CGCTTAAACC 600
TGGGAGGCGG AGGCTACCCT GGGCCGAGAT CACGCCATTG CACTCCAGCC TGGGCAACAA 660
GAGCGAAACT CTGTCTCAAA ATAAACAAAA CAAAAAAATC CCTGTGCTAG TTTAACAAAT 720
ACATTAAAAA ATCACAAGTT TAAAATGTTG AAAAGAAATC TCCCAGGCTA GGCTCAGTGG 780
TTCTTGCTTG TAATCCCAGC ACTTTGAGAG GACCACTTGA GCCCAGGAGT TTGAGACCAG 840
CCTGGGCAAT ATAGCAAGAC CCCAATCTCT ACAAAAAAAC AAAAAATTAG CCAGGCATGG 900
TGGTGTGCTC CTGTAGTCCC ATCTACTCAG GGAGCTGAGG TGGGAGGATC ACTTGAGCCT 960
GGGACGTCAA GGCTGCAGTG AGTCATATCC TGCCACTGCA CTCCAGCCTG GGTGACAAAG 1020
TGAGATCCTG TCTCCAAAAA ATAAAATAAA ATAAAATAAA CAAAACCCCA CATCTCCCTG 1080
TGATACGAGA CCACAGCTGA ACACACCAAT TCTCCAGTTG TGCTGACTGG CTCACCAATT 1140
AACATCTAGG AAACCATCAT ATATGTGAAA GGAACTCTGA GGCTTCTCAT TTTCCTCCAT 1200
ATTTGCTTTG GTCCCTTAGC TAAAATTCAC ATTTCTATCA TCTGCTGAGC AGAGATTTTA 1260
GTACCTAGAA AGGTGCAAAG TGTAGCCAAG GATGTGTTGA GTAGTGTAGC ACCAAGAGCC 1320
TACCAGCATT CAGGACCCTG CATCCAGGTG ACTGGCTGGA GTCCTGCCCT CTGGCCTTTC 1380
ATAGTCTCGC CTGTCTGTTT TAAGACAGGG TTTCACTCTC ACCCAGGCTG GAGTACAGTA 1440
GCACAATAAT GGCTCACTGC AACCTCCATT CCCCAGGCTC CAGTGATCTT CCCACCTCAG 1500
CCTCCCAAAT AGCTGGGACC AAAGATGCAT GACACCATGC CCGGCTAATT TTTGGTAGAC 1560
AAGGTTTTGC CATGTTATGC AGGCTAGTTT CAAACTCCTG GGCTCAGTCG ATCCACCTGC 1620
TTTGGCCTCT CTCAGTGCTG GGATTATAGG TGTGAGTCAC CACGCCCGGC TCACCTGCCT 1680
GTTTCTGAAG GGCACCATAA GGTTACTTCT GACCTGGCCT CAACAGAACA AGGATGAGCT 1740
CCATTCTCTT GACAAGAGAA CCATTCTTAA AGCAAGATAC CTGGCAAGCC CACTTACACA 1800
CCTTTCCCAT CCCTGATTCA GGGGGGCCCA GTCCCTGCAG AAATTCCTTT TCTGGCCCAG 1860
GTACAGTGGC TCACACGTGT AATCCCAGCA CTTTGGGAGG CCAAGGTGGG AGGACCACTT 1920
GAGCCCAGGA ATTCAAGACT GGCGTGGGCA ATGTAGCAAG ACCTTCTCTA CAGAAACAAA 1980
TTAATTAAAT TAATTTGGCA TCACAGTGCG TGCCCATAGT CCCAGTTACT CAGGAGGCTG 2040
CGGCTGGAGG ATCGCTTGAG CCCAGGAGTT TGAAGCTGCA ATGAGCTATG ACTGAACCAT 2100
TGCACTCCAG CCTGGGTGAC AGAGCAAGAC GCTGTCTTTA AAAAAAAAAA AAAAAAAAAA 2160
AAAAAAAAAA AAGTGAATGG GACCCCAGCC AGTCATGCTT TGGCGTCTGC AATATGAATG 2220
GCAGAGAAGC CCTATGGGAC CAAATCTGGG CTTCAGGGAC CCCTGGGCAT GCCTCCTTTA 2280
GCTGATTTTC TCTGGCAAGA CCAAGTAGTC TGCTGACTCA AAGTCCAGGA TGCTGCCAGG 2340
GGTAGAGATA CTGCCCTAAG CCACAGTGCC TCTACAGGCC TCTTATCCAC TGCTAAACCA 2400
TACACCTGGG AAACAGGGAC CATTTAACAT TCCCAGCTAA ATATGCCAAG TGACTTCACA 2460
TGTTTATCTT AAAGATGTCC AAAACGCAAC TGATTTTCTC CCCTAAACCT GTGATGGTGG 2520
GATGATTAAG CCTGAGTGGT CTACAGCAAG TTAAGTGCAA GGTGCTAAAT GAAGGTGACC 2580
TGAGATACAG CATCTACAAG GCAGTACCTC TCAACACAGG GCAACTTTGC TTCTCAGAGG 2640
GCATTTAGCA GTGTCTGAAG TAATTTTTGT ATTACAACTC AGGGGGTGGG GGGTGAATAT 2700
CTAGTGGATA GAGGCTAGGA ATGTTGTTAA ACATTCCACA ATAAACAGGA CAGCTGCCCA 2760
CAAATTATGT AGCCCCAAAT GTTAACAGTA TCAAAGTTGA AAAGCCCTGC TATAGGTGGC 2820
AAGGGAGGTT TTCGTTTTTA ACAGGAAGAC ATGCTTTATA GGGTAACAGG AACAAGAGAG 2880
TTGGTTGAGA GAAGGTTGAA ATCACAAGGT AGGATAATTG ACACTGAGAC TGGAGGGACT 2940
GGATTGAGGA ACAGGTGTGT AACAGCAGGC CCCATGAAGC AGGGGCACAT CTTCCTGAGA 3000
CTGGTAAGCA AGCCTGACAT GACCCGACAC ATTTGGACAA GCAAGAACAA GTTTATGTTC 3060
TACATCTCTG TCCTCTGAAA AACAGAGTTG AGGACTGCAG CGGCAGCTGG AGAATAAGGG 3120
CACTAAGTCC AAGGAACTGC AATGCTTTGC AACATCAACA GCCCATTTAT GACCACCTTT 3180
AATGGCAACT GGAGATTTTC ATCCTGCGTT TGGCAAGATG GGCACAGGAG TGGGAAAAAC 3240
AGATGAGCCA GGCTTGTGGA TGGGCTAGTG CAATACAGAC TGGAGAAGAA AATGAGGGCA 3300
GATTTTTAGA AAGCCAAGGG AACTTAACAG GGCAGAGGGG TCCACTGTGT AGAGAAGTTC 3360
TTGGCCAAGT CAAGGCGGGG GAGATAAATA CTCCGGGATT TCTTGGCTCT TTCTACTCCT 3420
TGGTTAGTTG CTGTTCCTTT CCCAAGTCTG GTATCTTCTA CTTCCCACCA CTAACTAAGC 3480
CCAGCCAATA ACAGACTGCC TAAGCCTGCC TGAGAACTTA ATCACTGTTC ATGTTATACA 3540
GTAAAATAGC AGGAAACTGA ATTAAAAAAA AAAACAACCC ACAAAACCAA 3590